RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
RHO-201ENST00000296271 MYO1BO43795 1136 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 KCNJ6P48051 423 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 NOVP48745 357 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 TNNI2P48788 182 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 KLK7P49862 253 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
RHO-201ENST00000296271 GNG11P61952 73 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 TCP11X2Q5H9J9 407 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 ACRBPQ8NEB7 543 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 KBTBD4Q9NVX7 518 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 RWDD2AQ9UIY3 292 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 STX10O60499 249 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 CCDC96Q2M329 555 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 SH3BP5LQ7L8J4 393 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 GLIS3Q8NEA6 775 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 SRRTQ9BXP5 876 aaKnown RBP13.26□□□□□ -0.29
RHO-201ENST00000296271 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 COL11A2P13942 1736 aaPredicted RBP13.26□□□□□ -0.29
RHO-201ENST00000296271 SCN9AQ15858 1988 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 NPR1P16066 1061 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 CRKP46108 304 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 ERVK-24P63145 666 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 JAG1P78504 1218 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 KRT25Q7Z3Z0 450 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 PPFIBP1Q86W92 1011 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 NUP88Q99567 741 aaPredicted RBP13.26□□□□□ -0.29
RHO-201ENST00000296271 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
RHO-201ENST00000296271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.26□□□□□ -0.29
RHO-201ENST00000296271 MFAP3LO75121 409 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 GDF11O95390 407 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 ZNF543Q08ER8 600 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 ECM1Q16610 540 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 CCSER1Q9C0I3 900 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 GNA11P29992 359 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 GRB10Q13322 594 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 MCM6Q14566 821 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 ZBTB9Q96C00 473 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 CHP1Q99653 195 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 TRIM9Q9C026 710 aa13.25□□□□□ -0.29
RHO-201ENST00000296271 PDGFDQ9GZP0 370 aaPredicted RBP13.25□□□□□ -0.29
RHO-201ENST00000296271 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
RHO-201ENST00000296271 TTLL1O95922 423 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ASIC1P78348 528 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 UBXN1Q04323 297 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 PDE4DQ08499 809 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ZSCAN29Q8IWY8 852 aaPredicted RBP13.24□□□□□ -0.29
RHO-201ENST00000296271 TEKT1Q969V4 418 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 PNMA5Q96PV4 448 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 DUSP9Q99956 384 aaKnown RBP13.24□□□□□ -0.29
RHO-201ENST00000296271 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 FAM198AQ9UFP1 575 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 IGSF3O75054 1194 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ADCY7P51828 1080 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 ANKRD40Q6AI12 368 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 TRIM47Q96LD4 638 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 P2RX7Q99572 595 aaKnown RBP13.24□□□□□ -0.29
RHO-201ENST00000296271 ZSWIM4Q9H7M6 989 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
RHO-201ENST00000296271 CALCRLQ16602 461 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 AOC3Q16853 763 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 FILIP1LQ4L180 1135 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
RHO-201ENST00000296271 C2CD5Q86YS7 1000 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 SIAH1Q8IUQ4 282 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
RHO-201ENST00000296271 MTMR9Q96QG7 549 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 MYMKA6NI61 221 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
RHO-201ENST00000296271 B4DLN1 442 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms