RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 UBE2SQ16763 222 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 ADGRG1Q9Y653 693 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 TDP2O95551 362 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 FCER1AP12319 257 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 ADSSL1Q8N142 457 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 GTPBP4Q9BZE4 634 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 MTMR4Q9NYA4 1195 aa17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
NCKIPSD-201ENST00000294129 GOLGA6L9A6NEM1 432 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 STIM1Q13586 685 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 KCTD1Q719H9 257 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 PCDHAC2Q9Y5I4 1007 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 GAKO14976 1311 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 PSMA7O14818 248 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 KLRC4O43908 158 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 TUBB4AP04350 444 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZNF569Q5MCW4 686 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 GPIHBP1Q8IV16 184 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 SLF1Q9BQI6 1058 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 DBNDD1Q9H9R9 158 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 EXOC1Q9NV70 894 aa17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
NCKIPSD-201ENST00000294129 POTEMA6NI47 508 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 ERVK-24P63145 666 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 SPAG1Q07617 926 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 DYMQ7RTS9 669 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 FEZ1Q99689 392 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 CCSER1Q9C0I3 900 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 KBTBD4Q9NVX7 518 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 OGFRQ9NZT2 677 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 MAGEC2Q9UBF1 373 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 TFRCP02786 760 aaKnown RBP17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 NFIAQ12857 509 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 STK4Q13043 487 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 CSGALNACT2Q8N6G5 542 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 PCMTD1Q96MG8 357 aaPredicted RBP17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 ABHD10Q9NUJ1 306 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZNF446Q9NWS9 450 aa17.74■□□□□ 0.43
NCKIPSD-201ENST00000294129 B4DLN1 442 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 SLC37A4O43826 429 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 CLCN6P51797 869 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 RBM5P52756 815 aaKnown RBP eCLIP17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 PPP2R3AQ06190 1150 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZNF622Q969S3 477 aaKnown RBP eCLIP17.73■□□□□ 0.435e-7■■■□□ 18.5
NCKIPSD-201ENST00000294129 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 CHP1Q99653 195 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 CALCRLQ16602 461 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 KIAA0825Q8IV33 1275 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 SLC39A2Q9NP94 309 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 H7C1D1 291 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 KIF5CO60282 957 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 TADA3O75528 432 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 ADCY7P51828 1080 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZFPM1Q8IX07 1006 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 KIFC2Q96AC6 838 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 CDK5RAP3Q96JB5 506 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 TRIM9Q9C026 710 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 TFR2Q9UP52 801 aa17.73■□□□□ 0.43
NCKIPSD-201ENST00000294129 LAD1O00515 517 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 MARCH6O60337 910 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 KLK7P49862 253 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 PROM2Q8N271 834 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 IDEP14735 1019 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 MCM6Q14566 821 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 ZSCAN29Q8IWY8 852 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 SP8Q8IXZ3 490 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 COA1Q9GZY4 146 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
NCKIPSD-201ENST00000294129 SEC31AO94979 1220 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 PRPHP41219 470 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 NAA15Q9BXJ9 866 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 NKRFO15226 690 aaKnown RBP eCLIP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 RHOBTB3O94955 611 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 ANKRD40Q6AI12 368 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 CDC42EP5Q6NZY7 148 aa17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 CCDC47Q96A33 483 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 MMTAG2Q9BU76 263 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-201ENST00000294129 RIOX1Q9H6W3 641 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms