RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 PLEKHH3Q7Z736 793 aa17.78■□□□□ 0.44
NCK1-201ENST00000288986 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
NCK1-201ENST00000288986 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.44
NCK1-201ENST00000288986 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.44
NCK1-201ENST00000288986 A0A0G2JMZ2 1700 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 HOXD10P28358 340 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 COPB2P35606 906 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 FBXO11Q86XK2 927 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 MTMR8Q96EF0 704 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 TRERF1Q96PN7 1200 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 SEC63Q9UGP8 760 aaKnown RBP17.77■□□□□ 0.44
NCK1-201ENST00000288986 PNMA2Q9UL42 364 aa17.77■□□□□ 0.44
NCK1-201ENST00000288986 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 hCG_1642624A0A1W2PR95 340 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 CPLX1O14810 134 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 GNRH1P01148 92 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 TAL1P17542 331 aaPredicted RBP17.76■□□□□ 0.43
NCK1-201ENST00000288986 AMNQ9BXJ7 453 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 STRNO43815 780 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
NCK1-201ENST00000288986 MCM4P33991 863 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 OTOP1Q7RTM1 612 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 CHST13Q8NET6 341 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 RNF146Q9NTX7 359 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 FBXO40Q9UH90 709 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 V9GY48 417 aaPredicted RBP17.76■□□□□ 0.43
NCK1-201ENST00000288986 NID2Q14112 1375 aa17.76■□□□□ 0.43
NCK1-201ENST00000288986 HTTP42858 3142 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 FCER1AP12319 257 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 SYT1P21579 422 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 NBR1Q14596 966 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 TKFCQ3LXA3 575 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 PCDHA1Q9Y5I3 950 aa17.75■□□□□ 0.43
NCK1-201ENST00000288986 PTPREP23469 700 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 PRKCZQ05513 592 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 FUT2Q10981 343 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 KCTD2Q14681 263 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
NCK1-201ENST00000288986 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
NCK1-201ENST00000288986 ANKRD35Q8N283 1001 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
NCK1-201ENST00000288986 PHKBQ93100 1093 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 NUDT12Q9BQG2 462 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 ACAD9Q9H845 621 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 SRRDQ9UH36 339 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 STX6O43752 255 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 PPP1R11O60927 126 aaPredicted RBP17.74■□□□□ 0.43
NCK1-201ENST00000288986 NTRK3Q16288 839 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 GBP4Q96PP9 640 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 MMP19Q99542 508 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 GABRQQ9UN88 632 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
NCK1-201ENST00000288986 IFNAR1P17181 557 aa17.73■□□□□ 0.43
NCK1-201ENST00000288986 FLT3LGP49771 235 aa17.73■□□□□ 0.43
NCK1-201ENST00000288986 AKAP17AQ02040 695 aaKnown RBP17.73■□□□□ 0.43
NCK1-201ENST00000288986 TRAF1Q13077 416 aa17.73■□□□□ 0.43
NCK1-201ENST00000288986 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
NCK1-201ENST00000288986 SLC26A6Q9BXS9 759 aa17.73■□□□□ 0.43
NCK1-201ENST00000288986 ABCB11O95342 1321 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 SLC15A5A6NIM6 579 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 ADORA2AP29274 412 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 DPP9Q86TI2 863 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 SOCS4Q8WXH5 440 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 GJD2Q9UKL4 321 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 MRPL11Q9Y3B7 192 aaKnown RBP17.72■□□□□ 0.43
NCK1-201ENST00000288986 ZSWIM8A7E2V4 1837 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 NFIBO00712 420 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 JAK2O60674 1132 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
NCK1-201ENST00000288986 CYP2B6P20813 491 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 PDCP20941 246 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 HMGN5P82970 282 aaKnown RBP17.72■□□□□ 0.43
NCK1-201ENST00000288986 GRB14Q14449 540 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 MORN1Q5T089 497 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 RAET1EQ8TD07 263 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
NCK1-201ENST00000288986 PRPF3O43395 683 aaKnown RBP17.71■□□□□ 0.43
NCK1-201ENST00000288986 CDKL5O76039 1030 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 PGK2P07205 417 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
NCK1-201ENST00000288986 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
NCK1-201ENST00000288986 HEATR3Q7Z4Q2 680 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 DOCK3Q8IZD9 2030 aa17.71■□□□□ 0.43
NCK1-201ENST00000288986 PTPDC1A2A3K4 754 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 RGS2P41220 211 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 PRMT2P55345 433 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 MAP2K5Q13163 448 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 GPKOWQ92917 476 aaPredicted RBP eCLIP17.7■□□□□ 0.42
NCK1-201ENST00000288986 RNF26Q9BY78 433 aaPredicted RBP17.7■□□□□ 0.42
NCK1-201ENST00000288986 A1CFQ9NQ94 594 aaKnown RBP17.7■□□□□ 0.42
NCK1-201ENST00000288986 SMCHD1A6NHR9 2005 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms