RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CDK8P49336 464 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
SMAD6-201ENST00000288840 CHMP2AO43633 222 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 TAF4BQ92750 862 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 PRDM4Q9UKN5 801 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 SLIT3O75094 1523 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 MDM2Q00987 491 aaPredicted RBP17.72■□□□□ 0.43
SMAD6-201ENST00000288840 ZYXQ15942 572 aaKnown RBP17.72■□□□□ 0.43
SMAD6-201ENST00000288840 CNNM4Q6P4Q7 775 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 SECISBP2LQ93073 1101 aaKnown RBP17.72■□□□□ 0.43
SMAD6-201ENST00000288840 CEP95Q96GE4 821 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 FAN1Q9Y2M0 1017 aa17.72■□□□□ 0.43
SMAD6-201ENST00000288840 FGFR1OPO95684 399 aaKnown RBP17.71■□□□□ 0.43
SMAD6-201ENST00000288840 DNM2P50570 870 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 ADCY7P51828 1080 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 TTC19Q6DKK2 380 aaPredicted RBP17.71■□□□□ 0.43
SMAD6-201ENST00000288840 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.43
SMAD6-201ENST00000288840 ADAMTS3O15072 1205 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 IQCEQ6IPM2 695 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 MB21D1Q8N884 522 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 USP8P40818 1118 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 MAP3K9P80192 1104 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.43
SMAD6-201ENST00000288840 TRIM14Q14142 442 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 MAEAQ7L5Y9 396 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 TXLNBQ8N3L3 684 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 P2RX5Q93086 422 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
SMAD6-201ENST00000288840 ZNF18P17022 549 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
SMAD6-201ENST00000288840 TRAPPC10P48553 1259 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 SLC7A5Q01650 507 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 STK4Q13043 487 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 LUC7LQ9NQ29 371 aaKnown RBP17.7■□□□□ 0.42
SMAD6-201ENST00000288840 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
SMAD6-201ENST00000288840 ODF2Q5BJF6 829 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 CLEC4GQ6UXB4 293 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 SND1Q7KZF4 910 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMAD6-201ENST00000288840 EHBP1Q8NDI1 1231 aa17.7■□□□□ 0.42
SMAD6-201ENST00000288840 ZNF185O15231 689 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 PMS1P54277 932 aaKnown RBP17.69■□□□□ 0.42
SMAD6-201ENST00000288840 C2orf54Q08AI8 447 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 GRIK5Q16478 980 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 ZSCAN26Q16670 478 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 NOA1Q8NC60 698 aaKnown RBP17.69■□□□□ 0.42
SMAD6-201ENST00000288840 CCDC51Q96ER9 411 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 TDP2O95551 362 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 SF3A3Q12874 501 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMAD6-201ENST00000288840 MEIS1O00470 390 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 VSNL1P62760 191 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 ERVK-24P63145 666 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 RASSF7Q02833 373 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 C12orf60Q5U649 245 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 MXD3Q9BW11 206 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 NHEJ1Q9H9Q4 299 aaPredicted RBP17.69■□□□□ 0.42
SMAD6-201ENST00000288840 PCDHA6Q9UN73 950 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 PCDHA8Q9Y5H6 950 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 FHOD1Q9Y613 1164 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 DUSP10Q9Y6W6 482 aa17.69■□□□□ 0.42
SMAD6-201ENST00000288840 ZEB2O60315 1214 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 CKAP4Q07065 602 aaKnown RBP17.68■□□□□ 0.42
SMAD6-201ENST00000288840 BCL9O00512 1426 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 MSL1Q68DK7 614 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 DGKHQ86XP1 1220 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 PCDHA12Q9UN75 941 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 H0YHG0 523 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 MOCS3O95396 460 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 SLURP2P0DP57 97 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 SLC1A4P43007 532 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 SPICE1Q8N0Z3 855 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 HAUS4Q9H6D7 363 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 USP21Q9UK80 565 aa17.68■□□□□ 0.42
SMAD6-201ENST00000288840 VGLL3A8MV65 326 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 PLCG2P16885 1265 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 BRD3Q15059 726 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 MAATS1Q7Z4T9 603 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 MED15Q96RN5 788 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 SMARCAL1Q9NZC9 954 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 KIAA1024Q9UPX6 916 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 N4BP1O75113 896 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 ATP1A1P05023 1023 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 FBXO33Q7Z6M2 555 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 TSPYL1Q9H0U9 437 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 LMO7Q8WWI1 1683 aa17.67■□□□□ 0.42
SMAD6-201ENST00000288840 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 H2AFXP16104 143 aaPredicted RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
SMAD6-201ENST00000288840 KLHL7Q8IXQ5 586 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms