RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZHX1Q9UKY1 873 aaPredicted RBP20.41■□□□□ 0.86
PCDH1-201ENST00000287008 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 OVOS2A0A0J9YW53 1432 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 OVOS2Q6IE36 1432 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 EVCP57679 992 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 ADAM9Q13443 819 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 TYW1BQ6NUM6 668 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 RASGRP4Q8TDF6 673 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 IFIH1Q9BYX4 1025 aaKnown RBP20.41■□□□□ 0.86
PCDH1-201ENST00000287008 NKIRAS1Q9NYS0 192 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 SOS2Q07890 1332 aaPredicted RBP20.41■□□□□ 0.86
PCDH1-201ENST00000287008 PLA2R1Q13018 1463 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 KCNJ18B7U540 433 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 CAPN9O14815 690 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 KCNJ12Q14500 433 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 CLIC6Q96NY7 704 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 MIS12Q9H081 205 aa20.41■□□□□ 0.86
PCDH1-201ENST00000287008 INO80B-WBP1J3KQ70 363 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 IFNAR1P17181 557 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 CCDC6Q16204 474 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 EXOC8Q8IYI6 725 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 ANKS4BQ8N8V4 417 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 SYMPKQ92797 1274 aaKnown RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 MED10Q9BTT4 135 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 INO80BQ9C086 356 aaPredicted RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 CUEDC2Q9H467 287 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 PIH1D3Q9NQM4 214 aaKnown RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 PPM1KQ8N3J5 372 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 ZSWIM5Q9P217 1185 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 ANKFY1Q9P2R3 1169 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 PNMA3Q9UL41 463 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 UTP11Q9Y3A2 253 aaKnown RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 TTLL3Q9Y4R7 772 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 FMNL1O95466 1100 aaPredicted RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 CDK8P49336 464 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 IRX5P78411 483 aaPredicted RBP20.4■□□□□ 0.86
PCDH1-201ENST00000287008 MORC3Q14149 939 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 TMEM179Q6ZVK1 233 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 AK8Q96MA6 479 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 SERPINA10Q9UK55 444 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 JCADQ9P266 1359 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 RGS12O14924 1447 aa20.4■□□□□ 0.86
PCDH1-201ENST00000287008 IGKV5-2P06315 115 aa20.39■□□□□ 0.86
PCDH1-201ENST00000287008 CFAP157Q5JU67 520 aa20.39■□□□□ 0.86
PCDH1-201ENST00000287008 MINPP1Q9UNW1 487 aa20.39■□□□□ 0.86
PCDH1-201ENST00000287008 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 U2AF1L4Q8WU68 220 aaKnown RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 CCDC51Q96ER9 411 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 MAP7D1Q3KQU3 841 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 DAAM2Q86T65 1068 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 XPO4Q9C0E2 1151 aaKnown RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 CD209Q9NNX6 404 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 FEZ2Q9UHY8 353 aaPredicted RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 ABL1P00519 1130 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 RPN1P04843 607 aaKnown RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 IVLP07476 585 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 CYP19A1P11511 503 aaPredicted RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 CPLX4Q7Z7G2 160 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 SLC17A8Q8NDX2 589 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 LARP4BQ92615 738 aaKnown RBP20.39■□□□□ 0.85
PCDH1-201ENST00000287008 TRIM31Q9BZY9 425 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 TSKSQ9UJT2 592 aa20.39■□□□□ 0.85
PCDH1-201ENST00000287008 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 LIFRP42702 1097 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 PPP2R5DQ14738 602 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 MAIP1Q8WWC4 291 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 COA7Q96BR5 231 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 AKT3Q9Y243 479 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 SLC39A14Q15043 492 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 GEN1Q17RS7 908 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 LONRF3Q496Y0 759 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 SESTD1Q86VW0 696 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 TBC1D31Q96DN5 1066 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.38■□□□□ 0.85
PCDH1-201ENST00000287008 RPAP1Q9BWH6 1393 aaPredicted RBP20.38■□□□□ 0.85
PCDH1-201ENST00000287008 DGKHQ86XP1 1220 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 ATP5DP30049 168 aa20.38■□□□□ 0.85
PCDH1-201ENST00000287008 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 POLR2BP30876 1174 aaKnown RBP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 GABPAQ06546 454 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 ZNF341Q9BYN7 854 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 GH2P01242 217 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 DNAJC21Q5F1R6 531 aaKnown RBP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 CCDC105Q8IYK2 499 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 NSUN7Q8NE18 718 aaKnown RBP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 PSMB7Q99436 277 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 ZEB2O60315 1214 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 ABCB4P21439 1286 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 CALRP27797 417 aaKnown RBP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 CRKP46108 304 aa20.37■□□□□ 0.85
PCDH1-201ENST00000287008 LACTBP83111 547 aaPredicted RBP20.37■□□□□ 0.85
PCDH1-201ENST00000287008 MKRN3Q13064 507 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms