RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
PTPRR-201ENST00000283228 PLEKHG1Q9ULL1 1385 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 TAF4BQ92750 862 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPRR-201ENST00000283228 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
PTPRR-201ENST00000283228 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 IFNAR2P48551 515 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 ANKS4BQ8N8V4 417 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 CUL5Q93034 780 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 TSGA10Q9BZW7 698 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 FAM237AA0A1B0GTK4 181 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 CAND2O75155 1236 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 ATP6V1G2O95670 118 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 IL15P40933 162 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 WTAPQ15007 396 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 WDR59Q6PJI9 974 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 RWDD2AQ9UIY3 292 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 PCDHA13Q9Y5I0 950 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 PSMA7O14818 248 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SEMA3EO15041 775 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 EIF4A3P38919 411 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 SCARF1Q14162 830 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 PLCB4Q15147 1175 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 UHMK1Q8TAS1 419 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
PTPRR-201ENST00000283228 TUBGCP2Q9BSJ2 902 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
PTPRR-201ENST00000283228 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
PTPRR-201ENST00000283228 EHHADHQ08426 723 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 YTHDF3Q7Z739 585 aaKnown RBP12.6□□□□□ -0.39
PTPRR-201ENST00000283228 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 EXOC1Q9NV70 894 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
PTPRR-201ENST00000283228 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
PTPRR-201ENST00000283228 PTGDRQ13258 359 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 NLRP3Q96P20 1036 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 G3BP2Q9UN86 482 aaKnown RBP12.6□□□□□ -0.39
PTPRR-201ENST00000283228 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
PTPRR-201ENST00000283228 MINDY4BA8MYZ0 360 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 SMIM24O75264 130 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 DYDC1Q8WWB3 177 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 ORAI2Q96SN7 254 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
PTPRR-201ENST00000283228 DRP2Q13474 957 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 NOX5Q96PH1 765 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 ELAC2Q9BQ52 826 aaKnown RBP12.59□□□□□ -0.39
PTPRR-201ENST00000283228 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 CAPN11Q9UMQ6 739 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 TECPR2O15040 1411 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 H7C1D1 291 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 EYA2O00167 538 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
PTPRR-201ENST00000283228 DNM2P50570 870 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 KIF11P52732 1056 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
PTPRR-201ENST00000283228 CASKIN2Q8WXE0 1202 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 RAPGEF5Q92565 580 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 SAMD15Q9P1V8 674 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 ZSWIM5Q9P217 1185 aa12.59□□□□□ -0.39
PTPRR-201ENST00000283228 DEXIO95424 95 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 KIF2BQ8N4N8 673 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 CCDC47Q96A33 483 aaKnown RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 DPH5Q9H2P9 285 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
PTPRR-201ENST00000283228 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 PCK1P35558 622 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 KRT2P35908 639 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 TTC38Q5R3I4 469 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 PIK3AP1Q6ZUJ8 805 aa12.58□□□□□ -0.4
PTPRR-201ENST00000283228 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms