RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 PTPRFP10586 1907 aa10.67□□□□□ -0.7
PDCD4-201ENST00000280154 SNAP23O00161 211 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 RSBN1LQ6PCB5 846 aaPredicted RBP10.66□□□□□ -0.7
PDCD4-201ENST00000280154 KCNV1Q6PIU1 500 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 PLPP6Q8IY26 295 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 CLIP3Q96DZ5 547 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 NELL2Q99435 816 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 IL25Q9H293 177 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 ZNHIT6Q9NWK9 470 aaKnown RBP10.66□□□□□ -0.7
PDCD4-201ENST00000280154 PITPNM2Q9BZ72 1349 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 TIPRLO75663 272 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 NOP2P46087 812 aaKnown RBP10.66□□□□□ -0.7
PDCD4-201ENST00000280154 MYRIPQ8NFW9 859 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 MAP4K1Q92918 833 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 IDI2Q9BXS1 227 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 USP17L3A6NCW0 530 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 USP17L4A6NCW7 530 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 RASSF7Q02833 373 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 PREPLQ4J6C6 727 aaPredicted RBP10.66□□□□□ -0.7
PDCD4-201ENST00000280154 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 USP17L1Q7RTZ2 530 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 FAM126AQ9BYI3 521 aaPredicted RBP10.66□□□□□ -0.7
PDCD4-201ENST00000280154 ANTXR1Q9H6X2 564 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
PDCD4-201ENST00000280154 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 IMMTQ16891 758 aaKnown RBP10.65□□□□□ -0.7
PDCD4-201ENST00000280154 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 TRIM17Q9Y577 477 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 CDKL5O76039 1030 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 PDE6AP16499 860 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 TRPC1P48995 793 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 MLLT1Q03111 559 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-201ENST00000280154 LRRFIP1Q32MZ4 808 aaKnown RBP10.65□□□□□ -0.7
PDCD4-201ENST00000280154 ADGRA1Q86SQ6 560 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 JPH3Q8WXH2 748 aaPredicted RBP10.65□□□□□ -0.7
PDCD4-201ENST00000280154 BRMS1Q9HCU9 246 aa10.65□□□□□ -0.7
PDCD4-201ENST00000280154 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
PDCD4-201ENST00000280154 TLDC2A0PJX2 215 aa10.65□□□□□ -0.71
PDCD4-201ENST00000280154 BICDL2A1A5D9 508 aa10.65□□□□□ -0.71
PDCD4-201ENST00000280154 GPC2Q8N158 579 aa10.65□□□□□ -0.71
PDCD4-201ENST00000280154 HVCN1Q96D96 273 aa10.65□□□□□ -0.71
PDCD4-201ENST00000280154 IWS1Q96ST2 819 aa10.65□□□□□ -0.71
PDCD4-201ENST00000280154 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.71
PDCD4-201ENST00000280154 ENPP1P22413 925 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 PEX19P40855 299 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 NECTIN1Q15223 517 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 C10orf76Q5T2E6 689 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 TSHZ3Q63HK5 1081 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 TTC12Q9H892 705 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-201ENST00000280154 EXOC1Q9NV70 894 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 PCNAP12004 261 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 GRIK5Q16478 980 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 AOC3Q16853 763 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 PARP9Q8IXQ6 854 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 PARD3BQ8TEW8 1205 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.64□□□□□ -0.71
PDCD4-201ENST00000280154 STRBPQ96SI9 672 aaKnown RBP10.64□□□□□ -0.71
PDCD4-201ENST00000280154 ANKRD33BA6NCL7 494 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 GLULP15104 373 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 GSTO1P78417 241 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 CCSAPQ6IQ19 270 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-201ENST00000280154 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 ZC3H12CQ9C0D7 883 aaKnown RBP10.64□□□□□ -0.71
PDCD4-201ENST00000280154 VEZTQ9HBM0 779 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 MAFFQ9ULX9 164 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
PDCD4-201ENST00000280154 RLFQ13129 1914 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 TRIM75PA6NK02 468 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 SMC2O95347 1197 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 CYP11B2P19099 503 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 APOBEC3HQ6NTF7 200 aaKnown RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 OSBP2Q969R2 916 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 CNTNAP1P78357 1384 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 TRIM21P19474 475 aaKnown RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 GPR101Q96P66 508 aaPredicted RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 SPATA7Q9P0W8 599 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 SNX5Q9Y5X3 404 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 RBBP6Q7Z6E9 1792 aaKnown RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 A0A0D9SFI3 127 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 FMNL1O95466 1100 aaPredicted RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 PCP11498 1178 aaKnown RBP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 CCDC173Q0VFZ6 552 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 HSP90AA4PQ58FG1 418 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 CHPFQ8IZ52 775 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 AGXT2Q9BYV1 514 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDCD4-201ENST00000280154 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
PDCD4-201ENST00000280154 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
PDCD4-201ENST00000280154 STMND1H3BQB6 276 aa10.62□□□□□ -0.71
PDCD4-201ENST00000280154 M0R2C6 588 aa10.62□□□□□ -0.71
PDCD4-201ENST00000280154 HSPA4P34932 840 aa10.62□□□□□ -0.71
PDCD4-201ENST00000280154 CXCL9Q07325 125 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms