RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 ZNF446Q9NWS9 450 aa12.81□□□□□ -0.36
SIRPB1-202ENST00000279477 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
SIRPB1-202ENST00000279477 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
SIRPB1-202ENST00000279477 SUGT1Q9Y2Z0 365 aa12.81□□□□□ -0.36
SIRPB1-202ENST00000279477 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 BBOX1O75936 387 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 ZRANB2O95218 330 aaKnown RBP eCLIP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 MTF1Q14872 753 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 ASPRV1Q53RT3 343 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 TEX35Q5T0J7 233 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 CNNM4Q6P4Q7 775 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 KRT9P35527 623 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 GPSM2P81274 684 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 BRD3Q15059 726 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 WHAMMP3Q1A5X7 153 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 SLC4A8Q2Y0W8 1093 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 MB21D1Q8N884 522 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 NAPGQ99747 312 aaPredicted RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 C7orf25Q9BPX7 421 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 LUC7L2Q9Y383 392 aaKnown RBP12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
SIRPB1-202ENST00000279477 CCDC151A5D8V7 595 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 KLRC4O43908 158 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 CCNE1P24864 410 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 PDE4CQ08493 712 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 SLC44A5Q8NCS7 719 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 USP21Q9UK80 565 aa12.79□□□□□ -0.36
SIRPB1-202ENST00000279477 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 PLCG1P19174 1290 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 FAM196AQ6ZSG2 479 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 SMIM5Q71RC9 77 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 IPO4Q8TEX9 1081 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 P2RX5Q93086 422 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ZNHIT6Q9NWK9 470 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ERLIN1O75477 346 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 IPO7O95373 1038 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ERVK-24P63145 666 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 KRT83P78385 493 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 LETM2Q2VYF4 491 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 CSGALNACT2Q8N6G5 542 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 ABCB11O95342 1321 aa12.78□□□□□ -0.36
SIRPB1-202ENST00000279477 SRGNP10124 158 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 CYLC1P35663 651 aaPredicted RBP12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 RHBDL3P58872 404 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 ASIC1P78348 528 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 FIGNQ5HY92 759 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 FOXR2Q6PJQ5 311 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 GBP3Q9H0R5 595 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 SWAP70Q9UH65 585 aa12.77□□□□□ -0.36
SIRPB1-202ENST00000279477 PVALEFA0A1B0GWK0 134 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 NDUFA10O95299 355 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 CDC25AP30304 524 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 ADCY7P51828 1080 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 PDE4DQ08499 809 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 FKBP15Q5T1M5 1219 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
SIRPB1-202ENST00000279477 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
SIRPB1-202ENST00000279477 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
SIRPB1-202ENST00000279477 GPS2Q13227 327 aa12.76□□□□□ -0.37
SIRPB1-202ENST00000279477 GRIK5Q16478 980 aa12.76□□□□□ -0.37
SIRPB1-202ENST00000279477 MEA1Q16626 185 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms