RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PLIN2Q99541 437 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 FUCA2Q9BTY2 467 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
SSRP1-201ENST00000278412 PSTPIP2Q9H939 334 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 GRPEL1Q9HAV7 217 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 DOCK1Q14185 1865 aa13.37□□□□□ -0.27
SSRP1-201ENST00000278412 BIN1O00499 593 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 MEIS2O14770 477 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF202O95125 648 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF408Q9H9D4 720 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF112Q9UJU3 913 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 OTOFQ9HC10 1997 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 PHIPQ8WWQ0 1821 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 PPP6R2O75170 966 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 RESP18Q5W5W9 173 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSRP1-201ENST00000278412 SNCAIPQ9Y6H5 919 aa13.36□□□□□ -0.27
SSRP1-201ENST00000278412 RRP9O43818 475 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 CMA1P23946 247 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 FBXO11Q86XK2 927 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 LRRC15Q8TF66 581 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 CDCA5Q96FF9 252 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 RPAP3Q9H6T3 665 aaPredicted RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 FCHSD1Q86WN1 690 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 SYMPKQ92797 1274 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 L3MBTL3Q96JM7 780 aaPredicted RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 RIC8AQ9NPQ8 531 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 HPSEQ9Y251 543 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF536O15090 1300 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 A0A1W2PQ27 194 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 A0A1W2PQ64 194 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 POLR2DO15514 142 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 ATP2C1P98194 919 aaPredicted RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
SSRP1-201ENST00000278412 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
SSRP1-201ENST00000278412 FLOT1O75955 427 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 PNOCQ13519 176 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 NONOQ15233 471 aaKnown RBP eCLIP13.34□□□□□ -0.27
SSRP1-201ENST00000278412 DCAF15Q66K64 600 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 AMNQ9BXJ7 453 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 PICK1Q9NRD5 415 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 KCNH3Q9ULD8 1083 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
SSRP1-201ENST00000278412 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 SRPRBQ9Y5M8 271 aaKnown RBP13.34□□□□□ -0.27
SSRP1-201ENST00000278412 NFIBO00712 420 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 CFBP00751 764 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 GNA11P29992 359 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 SYKP43405 635 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 BACE1P56817 501 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
SSRP1-201ENST00000278412 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 RGS22Q8NE09 1264 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 RIPK3Q9Y572 518 aa13.34□□□□□ -0.27
SSRP1-201ENST00000278412 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
SSRP1-201ENST00000278412 CUTAO60888 179 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 TTLL12Q14166 644 aaPredicted RBP13.33□□□□□ -0.28
SSRP1-201ENST00000278412 CUL5Q93034 780 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 SYAP1Q96A49 352 aaPredicted RBP13.33□□□□□ -0.28
SSRP1-201ENST00000278412 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 SERTAD1Q9UHV2 236 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
SSRP1-201ENST00000278412 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 DHX58Q96C10 678 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 SDF4Q9BRK5 362 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
SSRP1-201ENST00000278412 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
SSRP1-201ENST00000278412 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 IRF6O14896 467 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 TYRO3Q06418 890 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 DNAJC25Q9H1X3 360 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
SSRP1-201ENST00000278412 RLFQ13129 1914 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
SSRP1-201ENST00000278412 MMP14P50281 582 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
SSRP1-201ENST00000278412 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
SSRP1-201ENST00000278412 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms