RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 A0A1W2PRG0 241 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 NDUFB10O96000 172 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 STAT6P42226 847 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 FMR1Q06787 632 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRIM55-201ENST00000276573 FAM83AQ86UY5 434 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 CACTINQ8WUQ7 758 aaKnown RBP10.85□□□□□ -0.67
TRIM55-201ENST00000276573 MTMR9Q96QG7 549 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 MED15Q96RN5 788 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 GLT8D2Q9H1C3 349 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 VEZTQ9HBM0 779 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 IMPACTQ9P2X3 320 aa10.85□□□□□ -0.67
TRIM55-201ENST00000276573 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 TBC1D12O60347 775 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 BMP3P12645 472 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 LRMPQ12912 555 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 CUL4BQ13620 913 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
TRIM55-201ENST00000276573 UBE2SQ16763 222 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 CABP7Q86V35 215 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 JDP2Q8WYK2 163 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
TRIM55-201ENST00000276573 BLZF1Q9H2G9 400 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 TAOK3Q9H2K8 898 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
TRIM55-201ENST00000276573 TMEM232C9JQI7 657 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 CBFA2T2O43439 604 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 SERPINC1P01008 464 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
TRIM55-201ENST00000276573 TECP42680 631 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 UBASH3AP57075 661 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 TNIP1Q15025 636 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.83□□□□□ -0.68
TRIM55-201ENST00000276573 FILIP1Q7Z7B0 1213 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 LRRC8AQ8IWT6 810 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 SPTLC3Q9NUV7 552 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 PGAP2Q9UHJ9 254 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 NFE2L3Q9Y4A8 694 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 NFKBIEO00221 500 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 WNT10BO00744 389 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 ZNF18P17022 549 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 TNNI2P48788 182 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 MMP14P50281 582 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 MAP3K10Q02779 954 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 ARID5BQ14865 1188 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
TRIM55-201ENST00000276573 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 DPF2Q92785 391 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 TMEM39BQ9GZU3 492 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 TMX2Q9Y320 296 aa10.83□□□□□ -0.68
TRIM55-201ENST00000276573 SLC37A4O43826 429 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 TDP2O95551 362 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
TRIM55-201ENST00000276573 TXKP42681 527 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 ECE1P42892 770 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRIM55-201ENST00000276573 GSDMDP57764 484 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 PDIA5Q14554 519 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 CALCRLQ16602 461 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 SPATA1Q5VX52 437 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 TMC6Q7Z403 805 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 FBXO11Q86XK2 927 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 TRMT44Q8IYL2 757 aaKnown RBP10.82□□□□□ -0.68
TRIM55-201ENST00000276573 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 ACER1Q8TDN7 264 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
TRIM55-201ENST00000276573 PLIN2Q99541 437 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 AMNQ9BXJ7 453 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 MYOZ2Q9NPC6 264 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 KBTBD4Q9NVX7 518 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 RMND1Q9NWS8 449 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 PPP1R1BQ9UD71 204 aaPredicted RBP10.82□□□□□ -0.68
TRIM55-201ENST00000276573 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 MYL1P05976 194 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP11P51784 963 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 ZNF280AP59817 542 aaPredicted RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 SNAP25P60880 206 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 KIAA1755Q5JYT7 1200 aa10.81□□□□□ -0.68
TRIM55-201ENST00000276573 ZNF658Q5TYW1 1059 aaPredicted RBP10.81□□□□□ -0.68
TRIM55-201ENST00000276573 USP17L6PQ6QN14 398 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms