RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 TUBBP07437 444 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 ABI1Q8IZP0 508 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 SERPINB2P05120 415 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 GBP1P32455 592 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 SCRN1Q12765 414 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.32
SHPRH-201ENST00000275233 OSTNP61366 133 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 KCTD2Q14681 263 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 LLGL1Q15334 1064 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 HS1BP3Q53T59 392 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 GOLGA8FQ08AF8 430 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 GOLGA8DPQ0D2H9 430 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 LRRC41Q15345 812 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 RSRC1Q96IZ7 334 aaKnown RBP13.02□□□□□ -0.33
SHPRH-201ENST00000275233 SMYD2Q9NRG4 433 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 MAD1L1Q9Y6D9 718 aa13.02□□□□□ -0.33
SHPRH-201ENST00000275233 GSTA1P08263 222 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 GSTA2P09210 222 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 PLCB1Q9NQ66 1216 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 TMEM63CQ9P1W3 806 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 KDM5AP29375 1690 aaKnown RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 MYL7Q01449 175 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 RAB17Q9H0T7 212 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 XDHP47989 1333 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 CLIC2O15247 247 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 OSBPP22059 807 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 MARK3P27448 753 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 ZNF653Q96CK0 615 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 FNDC3AQ9Y2H6 1198 aaKnown RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 KIAA0232Q92628 1395 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 H7C0C1 242 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 PRKAB2O43741 272 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 STX2P32856 288 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 ATP5OP48047 213 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 COA7Q96BR5 231 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 INO80BQ9C086 356 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-201ENST00000275233 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
SHPRH-201ENST00000275233 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 THAP12O43422 761 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 DDAH1O94760 285 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PDE8BO95263 885 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 RNASELQ05823 741 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 LRFN2Q9ULH4 789 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ABT1Q9ULW3 272 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PFKFB2O60825 505 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 RXRBP28702 533 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PKP1Q13835 747 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 TUBB2AQ13885 445 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 OR8K1Q8NGG5 319 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 TUBB2BQ9BVA1 445 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 NUCKS1Q9H1E3 243 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 RIC8AQ9NPQ8 531 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PZPP20742 1482 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 TSPOAP1O95153 1857 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 RFX6Q8HWS3 928 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ABCF3Q9NUQ8 709 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ABCC2Q92887 1545 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ESYT2A0FGR8 921 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PDIA3P30101 505 aaKnown RBP13□□□□□ -0.33
SHPRH-201ENST00000275233 NLRP7Q8WX94 980 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 VCX3BQ9H321 246 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 EFCC1Q9HA90 598 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 PPME1Q9Y570 386 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
SHPRH-201ENST00000275233 CYP2D7A0A087X1C5 515 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 A6NJR5 290 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 MESDQ14696 234 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 PPP4R1Q8TF05 950 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 DYNLL2Q96FJ2 89 aa12.99□□□□□ -0.33
SHPRH-201ENST00000275233 CHMP6Q96FZ7 201 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms