RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 ZNFX1Q9P2E3 1918 aaKnown RBP26.47■■□□□ 1.83
C1orf35-201ENST00000272139 hCG_1642624A0A1W2PR95 340 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 ECM2O94769 699 aaPredicted RBP26.47■■□□□ 1.83
C1orf35-201ENST00000272139 ERCC3P19447 782 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 MAPK4P31152 587 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 SSRP1Q08945 709 aaKnown RBP26.47■■□□□ 1.83
C1orf35-201ENST00000272139 TKFCQ3LXA3 575 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 USH1GQ495M9 461 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 CCDC83Q8IWF9 413 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 SLC26A6Q9BXS9 759 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 RNF26Q9BY78 433 aaPredicted RBP26.47■■□□□ 1.83
C1orf35-201ENST00000272139 RBM27Q9P2N5 1060 aaKnown RBP26.47■■□□□ 1.83
C1orf35-201ENST00000272139 RIPK3Q9Y572 518 aa26.47■■□□□ 1.83
C1orf35-201ENST00000272139 PRPF3O43395 683 aaKnown RBP26.46■■□□□ 1.83
C1orf35-201ENST00000272139 FMNL1O95466 1100 aaPredicted RBP26.46■■□□□ 1.83
C1orf35-201ENST00000272139 FCGRTP55899 365 aa26.46■■□□□ 1.83
C1orf35-201ENST00000272139 ARMC5Q96C12 935 aa26.46■■□□□ 1.83
C1orf35-201ENST00000272139 TRERF1Q96PN7 1200 aa26.46■■□□□ 1.83
C1orf35-201ENST00000272139 HOMER2Q9NSB8 354 aa26.46■■□□□ 1.83
C1orf35-201ENST00000272139 PPFIA3O75145 1194 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 SLC9C1Q4G0N8 1177 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 CHST13Q8NET6 341 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 SNX21Q969T3 373 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 TRIM47Q96LD4 638 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 PCDHA1Q9Y5I3 950 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 PTCH2Q9Y6C5 1203 aa26.45■■□□□ 1.82
C1orf35-201ENST00000272139 PPP1R11O60927 126 aaPredicted RBP26.44■■□□□ 1.82
C1orf35-201ENST00000272139 RNF146Q9NTX7 359 aa26.44■■□□□ 1.82
C1orf35-201ENST00000272139 FBXO40Q9UH90 709 aa26.44■■□□□ 1.82
C1orf35-201ENST00000272139 IVNS1ABPQ9Y6Y0 642 aa26.44■■□□□ 1.82
C1orf35-201ENST00000272139 ABCB11O95342 1321 aa26.43■■□□□ 1.82
C1orf35-201ENST00000272139 SRRDQ9UH36 339 aa26.43■■□□□ 1.82
C1orf35-201ENST00000272139 ZSWIM8A7E2V4 1837 aa26.43■■□□□ 1.82
C1orf35-201ENST00000272139 CENPFP49454 3210 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 PLXNB2O15031 1838 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 TNPO2O14787 897 aaKnown RBP26.42■■□□□ 1.82
C1orf35-201ENST00000272139 CTDNEP1O95476 244 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 TAL1P17542 331 aaPredicted RBP26.42■■□□□ 1.82
C1orf35-201ENST00000272139 GPR142Q7Z601 462 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 PLEKHH3Q7Z736 793 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 COA7Q96BR5 231 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 ACAD9Q9H845 621 aa26.42■■□□□ 1.82
C1orf35-201ENST00000272139 MRPL11Q9Y3B7 192 aaKnown RBP26.42■■□□□ 1.82
C1orf35-201ENST00000272139 STRNO43815 780 aa26.41■■□□□ 1.82
C1orf35-201ENST00000272139 CTGFP29279 349 aa26.41■■□□□ 1.82
C1orf35-201ENST00000272139 ST3GAL1Q11201 340 aa26.41■■□□□ 1.82
C1orf35-201ENST00000272139 PFKFB3Q16875 520 aaPredicted RBP26.41■■□□□ 1.82
C1orf35-201ENST00000272139 HEATR3Q7Z4Q2 680 aa26.41■■□□□ 1.82
C1orf35-201ENST00000272139 HSCBQ8IWL3 235 aa26.41■■□□□ 1.82
C1orf35-201ENST00000272139 NSUN7Q8NE18 718 aaKnown RBP26.41■■□□□ 1.82
C1orf35-201ENST00000272139 LLPHQ9BRT6 129 aaKnown RBP26.41■■□□□ 1.82
C1orf35-201ENST00000272139 K7ELQ4 463 aaPredicted RBP26.4■■□□□ 1.82
C1orf35-201ENST00000272139 DEXIO95424 95 aa26.4■■□□□ 1.82
C1orf35-201ENST00000272139 FCER1AP12319 257 aa26.4■■□□□ 1.82
C1orf35-201ENST00000272139 SCG2P13521 617 aa26.4■■□□□ 1.82
C1orf35-201ENST00000272139 MUM1L1Q5H9M0 696 aa26.4■■□□□ 1.82
C1orf35-201ENST00000272139 PKN1Q16512 942 aa26.39■■□□□ 1.82
C1orf35-201ENST00000272139 RAET1EQ8TD07 263 aa26.39■■□□□ 1.82
C1orf35-201ENST00000272139 GPKOWQ92917 476 aaPredicted RBP eCLIP26.39■■□□□ 1.82
C1orf35-201ENST00000272139 ZNF333Q96JL9 665 aa26.39■■□□□ 1.82
C1orf35-201ENST00000272139 ORC3Q9UBD5 711 aaPredicted RBP26.39■■□□□ 1.82
C1orf35-201ENST00000272139 STK36Q9NRP7 1315 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 PTPDC1A2A3K4 754 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 hCG_1984214I3L0E3 225 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 DTNBO60941 627 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 PTPREP23469 700 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 KCTD2Q14681 263 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 ANKRD35Q8N283 1001 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 ZNF713Q8N859 430 aaPredicted RBP26.39■■□□□ 1.81
C1orf35-201ENST00000272139 MMP19Q99542 508 aa26.39■■□□□ 1.81
C1orf35-201ENST00000272139 WWC2Q6AWC2 1192 aa26.38■■□□□ 1.81
C1orf35-201ENST00000272139 MCF2L2Q86YR7 1114 aa26.38■■□□□ 1.81
C1orf35-201ENST00000272139 CLEC4DQ8WXI8 215 aa26.38■■□□□ 1.81
C1orf35-201ENST00000272139 DDX11Q96FC9 970 aa26.38■■□□□ 1.81
C1orf35-201ENST00000272139 BARHL2Q9NY43 387 aa26.38■■□□□ 1.81
C1orf35-201ENST00000272139 SLC15A5A6NIM6 579 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 NFIBO00712 420 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 JAK2O60674 1132 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 NSMFQ6X4W1 530 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 ABRAQ8N0Z2 381 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 WASF1Q92558 559 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 NUDT12Q9BQG2 462 aa26.37■■□□□ 1.81
C1orf35-201ENST00000272139 NAPAP54920 295 aa26.36■■□□□ 1.81
C1orf35-201ENST00000272139 HMGN5P82970 282 aaKnown RBP26.36■■□□□ 1.81
C1orf35-201ENST00000272139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.36■■□□□ 1.81
C1orf35-201ENST00000272139 TMEM106CQ9BVX2 250 aa26.36■■□□□ 1.81
C1orf35-201ENST00000272139 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.36■■□□□ 1.81
C1orf35-201ENST00000272139 RBBP6Q7Z6E9 1792 aaKnown RBP26.36■■□□□ 1.81
C1orf35-201ENST00000272139 FDPSP14324 419 aaKnown RBP26.35■■□□□ 1.81
C1orf35-201ENST00000272139 PRKCZQ05513 592 aa26.35■■□□□ 1.81
C1orf35-201ENST00000272139 RGS22Q8NE09 1264 aa26.35■■□□□ 1.81
C1orf35-201ENST00000272139 SMARCC2Q8TAQ2 1214 aa26.35■■□□□ 1.81
C1orf35-201ENST00000272139 CCDC12Q8WUD4 166 aaPredicted RBP26.35■■□□□ 1.81
C1orf35-201ENST00000272139 A1CFQ9NQ94 594 aaKnown RBP26.35■■□□□ 1.81
C1orf35-201ENST00000272139 PFASO15067 1338 aa26.35■■□□□ 1.81
C1orf35-201ENST00000272139 PLXNA1Q9UIW2 1896 aa26.34■■□□□ 1.81
C1orf35-201ENST00000272139 STXBP3O00186 592 aa26.34■■□□□ 1.81
C1orf35-201ENST00000272139 ADORA2AP29274 412 aa26.34■■□□□ 1.81
C1orf35-201ENST00000272139 CUL4AQ13619 759 aa26.34■■□□□ 1.81
C1orf35-201ENST00000272139 GRB14Q14449 540 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms