RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 ADGRG1Q9Y653 693 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 N4BP1O75113 896 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 TECP42680 631 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 ZNF131P52739 623 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 KRT31Q15323 416 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 SH2D4BQ5SQS7 431 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 CAPRIN2Q6IMN6 1127 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 TRIM7Q9C029 511 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 MTUS1Q9ULD2 1270 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 MADDQ8WXG6 1647 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 PHKA1P46020 1223 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 ADCY1Q08828 1119 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CCDC63Q8NA47 563 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 PRR29P0C7W0 189 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 POLE2P56282 527 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 RWDD2BP57060 319 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CNOT6LQ96LI5 555 aaKnown RBP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CTTNBP2NLQ9P2B4 639 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 ESYT3A0FGR9 886 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 FAM13AO94988 1023 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 PPARAQ07869 468 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 DENND2CQ68D51 928 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 CCDC105Q8IYK2 499 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 U2AF1L4Q8WU68 220 aaKnown RBP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 PANX2Q96RD6 677 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 ACTR5Q9H9F9 607 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
ERBB2-201ENST00000269571 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 NFU1Q9UMS0 254 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 GDAQ9Y2T3 454 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 FHOD1Q9Y613 1164 aa13.3□□□□□ -0.28
ERBB2-201ENST00000269571 SCP2P22307 547 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 SEL1L2Q5TEA6 688 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 LRRN4CLQ8ND94 238 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 CEP63Q96MT8 703 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 NBPF3Q9H094 633 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 PRKAB2O43741 272 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 PLCG2P16885 1265 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 SESN3P58005 492 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 RNF10Q8N5U6 811 aaKnown RBP13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ALDH3A1P30838 453 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 EPHB4P54760 987 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ARHGAP44Q17R89 818 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 GNPTABQ3T906 1256 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 STAG1Q8WVM7 1258 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 CCDC97Q96F63 343 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-201ENST00000269571 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
ERBB2-201ENST00000269571 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ABCA6Q8N139 1617 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 TFAP4Q01664 338 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 FAM114A2Q9NRY5 505 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
ERBB2-201ENST00000269571 GOLGA8HP0CJ92 632 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 STMN2Q93045 179 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 KLC4Q9NSK0 619 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 ZSWIM5Q9P217 1185 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 UFL1O94874 794 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 LRRC41Q15345 812 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 SMC6Q96SB8 1091 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 CYP27B1O15528 508 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 NR1D1P20393 614 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
ERBB2-201ENST00000269571 TSKSQ9UJT2 592 aa13.28□□□□□ -0.28
ERBB2-201ENST00000269571 BCAMP50895 628 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 PAGE5Q96GU1 130 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 NHEJ1Q9H9Q4 299 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.27□□□□□ -0.282e-6■■□□□ 14.1
ERBB2-201ENST00000269571 BIN2Q9UBW5 565 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 CHMP2AO43633 222 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 FLOT1O75955 427 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.28
ERBB2-201ENST00000269571 SLCO1A2P46721 670 aa13.27□□□□□ -0.28
ERBB2-201ENST00000269571 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms