RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SNAP25P60880 206 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
SSBP1-201ENST00000265304 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
SSBP1-201ENST00000265304 CCDC83Q8IWF9 413 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 USP6NLQ92738 828 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
SSBP1-201ENST00000265304 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
SSBP1-201ENST00000265304 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
SSBP1-201ENST00000265304 ZSWIM8A7E2V4 1837 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 FKTNO75072 461 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 CTGFP29279 349 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 CCDC174Q6PII3 467 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 ZNF296Q8WUU4 475 aaPredicted RBP16.48■□□□□ 0.23
SSBP1-201ENST00000265304 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
SSBP1-201ENST00000265304 MRPL11Q9Y3B7 192 aaKnown RBP16.48■□□□□ 0.23
SSBP1-201ENST00000265304 CTDP1Q9Y5B0 961 aaPredicted RBP16.48■□□□□ 0.23
SSBP1-201ENST00000265304 PTPDC1A2A3K4 754 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 STXBP3O00186 592 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 IGHA2P01877 340 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 HOXC6P09630 235 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 CAP1Q01518 475 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-201ENST00000265304 GRB14Q14449 540 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 MORN1Q5T089 497 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 ZMYND12Q9H0C1 365 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 ACAD9Q9H845 621 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
SSBP1-201ENST00000265304 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-201ENST00000265304 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-201ENST00000265304 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 FOXN1O15353 648 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 JAK2O60674 1132 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 HSPA8P11142 646 aaKnown RBP16.46■□□□□ 0.23
SSBP1-201ENST00000265304 PTPREP23469 700 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 HSD17B4P51659 736 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 AKAP17AQ02040 695 aaKnown RBP16.46■□□□□ 0.23
SSBP1-201ENST00000265304 MUM1L1Q5H9M0 696 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 GPR142Q7Z601 462 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 WASF1Q92558 559 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 COA7Q96BR5 231 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 ERO1AQ96HE7 468 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
SSBP1-201ENST00000265304 LOC102724159A0A0B4J2E5 919 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 ALAS1P13196 640 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 PLS1Q14651 629 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 PWP2Q15269 919 aaKnown RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 NPY5RQ15761 445 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 MCF2L2Q86YR7 1114 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 HSCBQ8IWL3 235 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 CYP39A1Q9NYL5 469 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 DIS3Q9Y2L1 958 aaKnown RBP16.45■□□□□ 0.22
SSBP1-201ENST00000265304 MCM3APO60318 1980 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 PFASO15067 1338 aa16.45■□□□□ 0.22
SSBP1-201ENST00000265304 NFIBO00712 420 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 MEIS2O14770 477 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 FCER1AP12319 257 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
SSBP1-201ENST00000265304 PSMC4P43686 418 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 PRMT2P55345 433 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 FCGRTP55899 365 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 ARHGEF6Q15052 776 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 NCAPG2Q86XI2 1143 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
SSBP1-201ENST00000265304 RIC8AQ9NPQ8 531 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
SSBP1-201ENST00000265304 M0R2N6 131 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 CLK2P49760 499 aaKnown RBP16.43■□□□□ 0.22
SSBP1-201ENST00000265304 IRF5Q13568 498 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 KIF22Q14807 665 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 USH1GQ495M9 461 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 SOCS4Q8WXH5 440 aa16.43■□□□□ 0.22
SSBP1-201ENST00000265304 GPKOWQ92917 476 aaPredicted RBP eCLIP16.43■□□□□ 0.225e-7■■■■■ 43.5
SSBP1-201ENST00000265304 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms