RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 SPECC1Q5M775 1068 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 LPAR1Q92633 364 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 FEM1BQ9UK73 627 aa11.34□□□□□ -0.59
SEC22C-201ENST00000264454 SMTNL1A8MU46 457 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 ACTN4O43707 911 aaKnown RBP11.33□□□□□ -0.6
SEC22C-201ENST00000264454 NEMFO60524 1076 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 ECE1P42892 770 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 USP11P51784 963 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 CT47A1Q5JQC4 288 aaPredicted RBP11.33□□□□□ -0.6
SEC22C-201ENST00000264454 COL13A1Q5TAT6 717 aaPredicted RBP11.33□□□□□ -0.6
SEC22C-201ENST00000264454 ACER1Q8TDN7 264 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 ZNF526Q8TF50 670 aaPredicted RBP11.33□□□□□ -0.6
SEC22C-201ENST00000264454 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 ZNF341Q9BYN7 854 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 CCDC39Q9UFE4 941 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 PNMA2Q9UL42 364 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
SEC22C-201ENST00000264454 PITPNM2Q9BZ72 1349 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 EGFRP00533 1210 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 UBA7P41226 1012 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 USP14P54578 494 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 TPM4P67936 248 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 IQCB1Q15051 598 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 LUZP1Q86V48 1076 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 SMARCE1Q969G3 411 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 NUP88Q99567 741 aaPredicted RBP11.32□□□□□ -0.6
SEC22C-201ENST00000264454 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 TMEM260Q9NX78 707 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 ZNF112Q9UJU3 913 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 PCDHA5Q9Y5H7 936 aa11.32□□□□□ -0.6
SEC22C-201ENST00000264454 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 IKBKBO14920 756 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 SLC34A2O95436 690 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 ADCY5O95622 1261 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 MYL1P05976 194 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 FDX1P10109 184 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 PNOCQ13519 176 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 PDIA5Q14554 519 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 IL17AQ16552 155 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 FAM83BQ5T0W9 1011 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 PDILTQ8N807 584 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 MLKLQ8NB16 471 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 DHX58Q96C10 678 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 GSDMAQ96QA5 445 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 FEZ1Q99689 392 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 TMEM60Q9H2L4 133 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
SEC22C-201ENST00000264454 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
SEC22C-201ENST00000264454 CYP3A7-CYP3A51PA0A087WV96 503 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 MEIS2O14770 477 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 SLC26A4O43511 780 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 CYP3A7P24462 503 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 E2F4Q16254 413 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 CALCRLQ16602 461 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 SARM1Q6SZW1 724 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 C11orf57Q6ZUT1 292 aaPredicted RBP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 MTMR9Q96QG7 549 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 ADARB2Q9NS39 739 aaKnown RBP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 MRPL11Q9Y3B7 192 aaKnown RBP11.3□□□□□ -0.6
SEC22C-201ENST00000264454 ABCB11O95342 1321 aa11.3□□□□□ -0.6
SEC22C-201ENST00000264454 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 TPM3P06753 285 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 UBE2SQ16763 222 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
SEC22C-201ENST00000264454 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms