RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 PANX2Q96RD6 677 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 CTDP1Q9Y5B0 961 aaPredicted RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 PHLPP2Q6ZVD8 1323 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 SARSP49591 514 aaKnown RBP18.19■□□□□ 0.5
CTCF-201ENST00000264010 RBL2Q08999 1139 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 CARD6Q9BX69 1037 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CTCF-201ENST00000264010 CTAGE9A4FU28 777 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 NYAP1Q6ZVC0 841 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 ERMNQ8TAM6 284 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 IL17RBQ9NRM6 502 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 STXBP3O00186 592 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 ERLIN1O75477 346 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 TXNRD1Q16881 649 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 CCDC40Q4G0X9 1142 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
CTCF-201ENST00000264010 LUC7LQ9NQ29 371 aaKnown RBP18.18■□□□□ 0.5
CTCF-201ENST00000264010 LAMA4Q16363 1823 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 CASP14P31944 242 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 CACNA2D4Q7Z3S7 1137 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 KIAA0825Q8IV33 1275 aa18.18■□□□□ 0.5
CTCF-201ENST00000264010 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
CTCF-201ENST00000264010 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 EVX2Q03828 476 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 COA7Q96BR5 231 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 GDAQ9Y2T3 454 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 IL1R1P14778 569 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 TRAF1Q13077 416 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 KRT31Q15323 416 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 DHTKD1Q96HY7 919 aaPredicted RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 A0A1B0GTH6 734 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 PLCG1P19174 1290 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 PRPHP41219 470 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 KRT83P78385 493 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 EEF1GP26641 437 aaKnown RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 C2CD5Q86YS7 1000 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 DAGLBQ8NCG7 672 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 NUP58Q9BVL2 599 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 FAM107BQ9H098 131 aa18.17■□□□□ 0.5
CTCF-201ENST00000264010 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
CTCF-201ENST00000264010 RNF187Q5TA31 235 aaPredicted RBP18.16■□□□□ 0.5
CTCF-201ENST00000264010 EHBP1Q8NDI1 1231 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 GOLGA1Q92805 767 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 MYCBPQ99417 103 aaPredicted RBP18.16■□□□□ 0.5
CTCF-201ENST00000264010 CCSER1Q9C0I3 900 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 COL1A1P02452 1464 aaPredicted RBP18.16■□□□□ 0.5
CTCF-201ENST00000264010 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 TEX33O43247 280 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 USO1O60763 962 aaKnown RBP18.16■□□□□ 0.5
CTCF-201ENST00000264010 PPP2R3AQ06190 1150 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 VPS18Q9P253 973 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 PP2D1A8MPX8 630 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
CTCF-201ENST00000264010 DNM2P50570 870 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 NR1I3Q14994 352 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 DYMQ7RTS9 669 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 OR8K1Q8NGG5 319 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 MASTLQ96GX5 879 aa18.16■□□□□ 0.5
CTCF-201ENST00000264010 POTEB2H3BUK9 544 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 CTIFO43310 598 aaKnown RBP18.15■□□□□ 0.5
CTCF-201ENST00000264010 HNRNPH2P55795 449 aaKnown RBP18.15■□□□□ 0.5
CTCF-201ENST00000264010 ORC2Q13416 577 aaPredicted RBP18.15■□□□□ 0.5
CTCF-201ENST00000264010 CERKLQ49MI3 558 aaPredicted RBP18.15■□□□□ 0.5
CTCF-201ENST00000264010 TCP11X2Q5H9J9 407 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 MMP10P09238 476 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 SMARCA1P28370 1054 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 ERCC6LQ2NKX8 1250 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 DBNDD1Q9H9R9 158 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 PRCPP42785 496 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 SEMA3FQ13275 785 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 ZSCAN26Q16670 478 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 ZMYND12Q9H0C1 365 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 MTMR4Q9NYA4 1195 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 TCEAL9Q9UHQ7 104 aa18.15■□□□□ 0.5
CTCF-201ENST00000264010 BMP6P22004 513 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 TUBB2AQ13885 445 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 GRIK5Q16478 980 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 TUBB2BQ9BVA1 445 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 MMRN2Q9H8L6 949 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 AKR1B1P15121 316 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 STK17AQ9UEE5 414 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 MFAP3LO75121 409 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 ZNF18P17022 549 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms