RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 GTF2IP78347 998 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 YAF2Q8IY57 180 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 SLC7A3Q8WY07 619 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 XAB2Q9HCS7 855 aaKnown RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 ARHGDIAP52565 204 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 RGS16O15492 202 aaPredicted RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 DRP2Q13474 957 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 LRRC4Q9HBW1 653 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 PCDHA1Q9Y5I3 950 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 GPC4O75487 556 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 SLC4A1P02730 911 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 STX2P32856 288 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 FRA10AC1Q70Z53 315 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 NRBF2Q96F24 287 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 C16orf72Q14CZ0 275 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 GPBP1Q86WP2 473 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 LBHD1Q9BQE6 289 aaPredicted RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 MTIF3Q9H2K0 278 aaKnown RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 DDX25Q9UHL0 483 aaKnown RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 MAD1L1Q9Y6D9 718 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 THOC5Q13769 683 aaKnown RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 MAPKAPK5Q8IW41 473 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 CXorf38Q8TB03 319 aa17.99■□□□□ 0.47
USP13-201ENST00000263966 NR1H4Q96RI1 486 aaPredicted RBP17.99■□□□□ 0.47
USP13-201ENST00000263966 NDUFAB1O14561 156 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 PAMP19021 973 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 MX2P20592 715 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 LRRC43Q8N309 656 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 MEIS3Q99687 375 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
USP13-201ENST00000263966 C2orf69Q8N8R5 385 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 COA7Q96BR5 231 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 LARSQ9P2J5 1176 aaKnown RBP17.98■□□□□ 0.47
USP13-201ENST00000263966 GPAA1O43292 621 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 CHEK2O96017 543 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 CA4P22748 312 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 SZRD1Q7Z422 152 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 PATL1Q86TB9 770 aaKnown RBP17.98■□□□□ 0.47
USP13-201ENST00000263966 BRD1O95696 1058 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 KRT87PA6NCN2 255 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 TCP10L2B9ZVM9 353 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 PPP1R9AQ9ULJ8 1098 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 SOX5P35711 763 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 LONRF2Q1L5Z9 754 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 DHX38Q92620 1227 aaKnown RBP17.98■□□□□ 0.47
USP13-201ENST00000263966 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
USP13-201ENST00000263966 MLKLQ8NB16 471 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 FBXL13Q8NEE6 735 aa17.98■□□□□ 0.47
USP13-201ENST00000263966 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.47
USP13-201ENST00000263966 H7C0C1 242 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
USP13-201ENST00000263966 GCP02774 474 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 ATP5OP48047 213 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
USP13-201ENST00000263966 CABP7Q86V35 215 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 EFHD1Q9BUP0 239 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
USP13-201ENST00000263966 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 GALNT17Q6IS24 598 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 RXRBP28702 533 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 TMTC1Q8IUR5 882 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 IFIH1Q9BYX4 1025 aaKnown RBP17.97■□□□□ 0.47
USP13-201ENST00000263966 DYRK4Q9NR20 520 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 PCDHB4Q9Y5E5 795 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 INHBAP08476 426 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 PTK2Q05397 1052 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 NELFBQ8WX92 580 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 METTL22Q9BUU2 404 aaPredicted RBP17.97■□□□□ 0.47
USP13-201ENST00000263966 SLC12A1Q13621 1099 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 MUM1Q2TAK8 710 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 MAPK8IP1Q9UQF2 711 aa17.97■□□□□ 0.47
USP13-201ENST00000263966 SMCO2A6NFE2 343 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ABCB5Q2M3G0 1257 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ANKRD44Q8N8A2 993 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ENOX1Q8TC92 643 aaKnown RBP17.96■□□□□ 0.47
USP13-201ENST00000263966 SNX19Q92543 992 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 SLC10A4Q96EP9 437 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 XAGE2Q96GT9 111 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.47
USP13-201ENST00000263966 FAM186BQ8IYM0 893 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 DNAAF3Q8N9W5 541 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
USP13-201ENST00000263966 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 BFSP1Q12934 665 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ANKRD20A4Q4UJ75 823 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ANKRD20A8PQ5CZ79 823 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ANKRD20A2Q5SQ80 823 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ANKRD20A1Q5TYW2 823 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 HOMER3Q9NSC5 361 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 ARPP19P56211 112 aa17.96■□□□□ 0.47
USP13-201ENST00000263966 CEP85Q6P2H3 762 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms