RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 EFCAB13Q8IY85 973 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 ZNF148Q9UQR1 794 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 RPS6KA2Q15349 733 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 P3H4Q92791 437 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 G3BP2Q9UN86 482 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 NOVA2Q9UNW9 492 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMG6-201ENST00000263073 FIS1Q9Y3D6 152 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 H7C1D1 291 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 TOGARAM2Q6ZUX3 1019 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 EYA3Q99504 573 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 YTHDC2Q9H6S0 1430 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 NOP56O00567 594 aaKnown RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 CASP2P42575 452 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 SLC12A2P55011 1212 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 SLC8A3P57103 927 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 UBXN2AP68543 259 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 AIFM3Q96NN9 605 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 CTNND1O60716 968 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 LRRN2O75325 713 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 PNMA6AP0CW24 399 aaPredicted RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 AFAP1L2Q8N4X5 818 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 YWHAGP61981 247 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMG6-201ENST00000263073 CASP8Q14790 479 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 PUS3Q9BZE2 481 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 GAS7O60861 476 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 FOXD4Q12950 439 aaPredicted RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 ZCCHC17Q9NP64 241 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 ZNF518AQ6AHZ1 1483 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 USP27XA6NNY8 438 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 NR5A1Q13285 461 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 SSH3Q8TE77 659 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
SMG6-201ENST00000263073 OR52Z1P0C646 297 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 TTLL7Q6ZT98 887 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 GJB4Q9NTQ9 266 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 BTG4Q9NY30 223 aa13.19□□□□□ -0.3
SMG6-201ENST00000263073 PHLPP2Q6ZVD8 1323 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 STAM2O75886 525 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 PHBP35232 272 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 TAF11Q15544 211 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 DBN1Q16643 649 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 BZW2Q9Y6E2 419 aaKnown RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 SGK1O00141 431 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 CLIC2O15247 247 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 SUN1O94901 812 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 PDE6CP51160 858 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 DYNLT1P63172 113 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 TMED1Q13445 227 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 GNA14O95837 355 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 DPP8Q6V1X1 898 aaPredicted RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 TRAPPC8Q9Y2L5 1435 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 A2MP01023 1474 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 CYP21A2P08686 494 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 RBBP5Q15291 538 aaKnown RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 HIBCHQ6NVY1 386 aaPredicted RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
SMG6-201ENST00000263073 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 PARP3Q9Y6F1 533 aa13.18□□□□□ -0.3
SMG6-201ENST00000263073 SCG2P13521 617 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 TMOD1P28289 359 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 BFSP1Q12934 665 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 SLFNL1Q499Z3 407 aa13.17□□□□□ -0.3
SMG6-201ENST00000263073 MIER3Q7Z3K6 550 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms