RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PSEN1P49768 467 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 MYCBPAPQ8TBZ2 947 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 IGDCC4Q8TDY8 1250 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 PALLDQ8WX93 1383 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 H7C1D1 291 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 PSMD14O00487 310 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 GLI1P08151 1106 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 LRRC41Q15345 812 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 MLXIPLQ9NP71 852 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 LMTK2Q8IWU2 1503 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 PXDNLA1KZ92 1463 aa17.62■□□□□ 0.41
PRPF40B-201ENST00000261897 CTNND1O60716 968 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 GKAP1Q5VSY0 366 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 EPN3Q9H201 632 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 RWDD2AQ9UIY3 292 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 TCP1P17987 556 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 FOXO4P98177 505 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 LETM2Q2VYF4 491 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 ESR2Q92731 530 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 UBA5Q9GZZ9 404 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 L3MBTL1Q9Y468 752 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 AGLP35573 1532 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 SWT1Q5T5J6 900 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 PAIP2Q9BPZ3 127 aaKnown RBP17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
PRPF40B-201ENST00000261897 LGALS16A8MUM7 142 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 GTPBP6O43824 516 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 ADD2P35612 726 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 SARSP49591 514 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 INF2Q27J81 1249 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 CYFIP2Q96F07 1278 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 TCP11L1Q9NUJ3 509 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 ATP8A1Q9Y2Q0 1164 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 GOLGA6L10A0A0M3HER8 536 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 MAGOHP61326 146 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 NTRK3Q16288 839 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 PTGISQ16647 500 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 KIAA0753Q2KHM9 967 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 ZNF658Q5TYW1 1059 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 FMNL3Q8IVF7 1028 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 MAGOHBQ96A72 148 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 FERMT2Q96AC1 680 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 GREM2Q9H772 168 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 XDHP47989 1333 aa17.6■□□□□ 0.41
PRPF40B-201ENST00000261897 MDH1P40925 334 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 NELFCDQ8IXH7 590 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 LUC7LQ9NQ29 371 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 AATFQ9NY61 560 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 TSPY2A6NKD2 308 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 NMT2O60551 498 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 SLC1A4P43007 532 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 CCDC63Q8NA47 563 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 TARSL2A2RTX5 802 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 KRT18P05783 430 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 FCER1AP12319 257 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 ZKSCAN8Q15776 578 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 ALS2CLQ60I27 953 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 HVCN1Q96D96 273 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 TSGA10Q9BZW7 698 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 STX8Q9UNK0 236 aa17.59■□□□□ 0.41
PRPF40B-201ENST00000261897 PALMO75781 387 aa17.58■□□□□ 0.41
PRPF40B-201ENST00000261897 ANKS4BQ8N8V4 417 aa17.58■□□□□ 0.41
PRPF40B-201ENST00000261897 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.41
PRPF40B-201ENST00000261897 USP31Q70CQ4 1352 aa17.58■□□□□ 0.41
PRPF40B-201ENST00000261897 KRT13P13646 458 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 TNNC1P63316 161 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 SPAG5Q96R06 1193 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 ELAC2Q9BQ52 826 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 KIF1CO43896 1103 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 ZBED6P86452 979 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 DAAM2Q86T65 1068 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 ATP6V1G3Q96LB4 118 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 RNF41Q9H4P4 317 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 KIF9Q9HAQ2 790 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 CPSF2Q9P2I0 782 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 LIMA1Q9UHB6 759 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 ADAMTS1Q9UHI8 967 aa17.58■□□□□ 0.4
PRPF40B-201ENST00000261897 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 MLH3Q9UHC1 1453 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 GMNCA6NCL1 334 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 LRRC53A6NM62 1247 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 TRAF5O00463 557 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 FOXP2O15409 715 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 MIEF2Q96C03 454 aa17.57■□□□□ 0.4
PRPF40B-201ENST00000261897 ZBTB10Q96DT7 871 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms