RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CCDC172P0C7W6 258 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 GMCL1Q96IK5 515 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 GOPCQ9HD26 462 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 CLCN6P51797 869 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 FILIP1Q7Z7B0 1213 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 BANK1Q8NDB2 785 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 TRIM5Q9C035 493 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 UBA5Q9GZZ9 404 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 DEF6Q9H4E7 631 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 PPP1R12BO60237 982 aaPredicted RBP21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 IQUBQ8NA54 791 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 KCND1Q9NSA2 647 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 PSD3Q9NYI0 1048 aa21.43■■□□□ 1.02
COL4A3BP-201ENST00000261415 NF2P35240 595 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 TRIM29Q14134 588 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 PFKFB3Q16875 520 aaPredicted RBP21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 NOL9Q5SY16 702 aaKnown RBP21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 KRT40Q6A162 431 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 TTBK2Q6IQ55 1244 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 TMCO3Q6UWJ1 677 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 CACTINQ8WUQ7 758 aaKnown RBP21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 RIOX1Q9H6W3 641 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 PICK1Q9NRD5 415 aa21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 RRP15Q9Y3B9 282 aaKnown RBP21.42■■□□□ 1.02
COL4A3BP-201ENST00000261415 ZRANB2O95218 330 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 SCG2P13521 617 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 ZYXQ15942 572 aaKnown RBP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 TTC31Q49AM3 519 aaPredicted RBP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 KIAA1755Q5JYT7 1200 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 MAP1SQ66K74 1059 aaPredicted RBP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 SPICE1Q8N0Z3 855 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 NUP88Q99567 741 aaPredicted RBP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 NMRK2Q9NPI5 230 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 TRPM7Q96QT4 1865 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 PTPRAP18433 802 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 GYS2P54840 703 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
COL4A3BP-201ENST00000261415 RESTQ13127 1097 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 L2HGDHQ9H9P8 463 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 BMP3P12645 472 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 SLC16A2P36021 539 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 SMARCE1Q969G3 411 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 SHISA4Q96DD7 197 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 UBXN6Q9BZV1 441 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 VAT1LQ9HCJ6 419 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 LCMT1Q9UIC8 334 aa21.4■■□□□ 1.02
COL4A3BP-201ENST00000261415 TUBB4AP04350 444 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 XBP1P17861 261 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 MAGEA9P43362 315 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 CCDC91Q7Z6B0 441 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 HOMER1Q86YM7 354 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 LRRC8AQ8IWT6 810 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 RRP36Q96EU6 259 aaKnown RBP21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 KIAA1683Q9H0B3 1180 aa21.39■■□□□ 1.02
COL4A3BP-201ENST00000261415 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 POLR3GO15318 223 aaPredicted RBP21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 ATP2B1P20020 1258 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 IREB2P48200 963 aaKnown RBP21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 MAP3K9P80192 1104 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 VGLL4Q14135 290 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 MAP3K11Q16584 847 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 LDHDQ86WU2 507 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 ADGRF4Q8IZF3 695 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 PIGSQ96S52 555 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 WDR18Q9BV38 432 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 ZSCAN16Q9H4T2 348 aaPredicted RBP21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 AS3MTQ9HBK9 375 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 KCNJ14Q9UNX9 436 aa21.39■■□□□ 1.01
COL4A3BP-201ENST00000261415 MMP1P03956 469 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 IVLP07476 585 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 JMJD4Q9H9V9 463 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 SEC63Q9UGP8 760 aaKnown RBP21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 SNCAIPQ9Y6H5 919 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 TYRO3Q06418 890 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 GPKOWQ92917 476 aaPredicted RBP eCLIP21.38■■□□□ 1.012e-6■■■■■ 30.4
COL4A3BP-201ENST00000261415 MRVI1Q9Y6F6 885 aa21.38■■□□□ 1.01
COL4A3BP-201ENST00000261415 USP17L10C9JJH3 530 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 KIF23Q02241 960 aaPredicted RBP21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 SPP2Q13103 211 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 MTMR2Q13614 643 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 ERCC6LQ2NKX8 1250 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 FAM83BQ5T0W9 1011 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 LUZP1Q86V48 1076 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 ZNF280CQ8ND82 737 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 EXOC4Q96A65 974 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 CSADQ9Y600 493 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 ZHX2Q9Y6X8 837 aa21.37■■□□□ 1.01
COL4A3BP-201ENST00000261415 TMEM232C9JQI7 657 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 TRAF5O00463 557 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 KIF1CO43896 1103 aaKnown RBP21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 TPM1P09493 284 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 TTLL12Q14166 644 aaPredicted RBP21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 CT47A1Q5JQC4 288 aaPredicted RBP21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 FAM173BQ6P4H8 233 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 CEP120Q8N960 986 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 MNS1Q8NEH6 495 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms