RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 SKA1Q96BD8 255 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 CCSER1Q9C0I3 900 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 CLIC5Q9NZA1 410 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 BCORL1Q5H9F3 1711 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 A6NJR5 290 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 SPTLC1O15269 473 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 NMT2O60551 498 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 TUBB4AP04350 444 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 RPN1P04843 607 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 ALDH2P05091 517 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 GZMAP12544 262 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 PRKACBP22694 351 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 HSPA4P34932 840 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 DPYSQ14117 519 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 NXNQ6DKJ4 435 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 PRPF18Q99633 342 aaKnown RBP8.53□□□□□ -1.04
GPNMB-201ENST00000258733 EPC1Q9H2F5 836 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 PFDN4Q9NQP4 134 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 KCND1Q9NSA2 647 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 HEY1Q9Y5J3 304 aa8.53□□□□□ -1.04
GPNMB-201ENST00000258733 ATAD2Q6PL18 1390 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 DNAJC8O75937 253 aaPredicted RBP8.52□□□□□ -1.04
GPNMB-201ENST00000258733 FGAP02671 866 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 STAT3P40763 770 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 B2MP61769 119 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 TAF1CQ15572 869 aaPredicted RBP8.52□□□□□ -1.04
GPNMB-201ENST00000258733 MAPRE1Q15691 268 aaKnown RBP8.52□□□□□ -1.04
GPNMB-201ENST00000258733 CCDC183Q5T5S1 534 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 NEK5Q6P3R8 708 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.52□□□□□ -1.04
GPNMB-201ENST00000258733 BRSK1Q8TDC3 778 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 RUNDC1Q96C34 613 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 GIMAP5Q96F15 307 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 PAWRQ96IZ0 340 aaKnown RBP8.52□□□□□ -1.04
GPNMB-201ENST00000258733 ATPIF1Q9UII2 106 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.04
GPNMB-201ENST00000258733 GAKO14976 1311 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 E9PCH4 1651 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 AKR1B15C9JRZ8 316 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-201ENST00000258733 AP3B1O00203 1094 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 N4BP3O15049 544 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 PER1O15534 1290 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-201ENST00000258733 KATNA1O75449 491 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 ANP32DO95626 131 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 ZSCAN22P10073 491 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-201ENST00000258733 KIF5BP33176 963 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 DAPK1P53355 1430 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 AP2B1P63010 937 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 PDE1BQ01064 536 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 SP140Q13342 867 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 C6orf183Q5T699 404 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 TEX9Q8N6V9 391 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 GOLPH3LQ9H4A5 285 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
GPNMB-201ENST00000258733 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 MAP3K13O43283 966 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 KPNA6O60684 536 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 UPP2O95045 317 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 APOEP02649 317 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 POTEJP0CG39 1038 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ACADSBP45954 432 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 IRAK1P51617 712 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 NLRP5P59047 1200 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 DSTNP60981 165 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 PIP4K2BP78356 416 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 BASP1P80723 227 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 DRP2Q13474 957 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 E2F2Q14209 437 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 TRIM71Q2Q1W2 868 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 HNRNPLLQ8WVV9 542 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 DPF3Q92784 378 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CASP10Q92851 521 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 FERD3LQ96RJ6 166 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 PLCB1Q9NQ66 1216 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 POLG2Q9UHN1 485 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 EXOC7Q9UPT5 735 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 TSC22D4Q9Y3Q8 395 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ITIH6Q6UXX5 1313 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 A0A1W2PRQ8 180 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 BIRC5O15392 142 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ACSL4O60488 711 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 SEC24DO94855 1032 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 COL6A1P12109 1028 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 PSMA3P25788 255 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ADD2P35612 726 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 MXI1P50539 228 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 TUBA4AP68366 448 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 GNL2Q13823 731 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 TSHZ3Q63HK5 1081 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 CRELD2Q6UXH1 353 aaPredicted RBP8.51□□□□□ -1.05
GPNMB-201ENST00000258733 ZNF365Q70YC5 407 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 BEND5Q7L4P6 421 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 LSMEM2Q8N112 164 aa8.51□□□□□ -1.05
GPNMB-201ENST00000258733 SMC6Q96SB8 1091 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms