RNA–Protein interactions for RNA: ENST00000257414.12

SEMA6A-201, Transcript of semaphorin 6A, humanhuman

TSL 1 (best) BASIC

Gene SEMA6A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-201ENST00000257414 CUL5Q93034 780 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 ATP2C2O75185 946 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 MYL1P05976 194 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 GNGT1P63211 74 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 CCDC170Q8IYT3 715 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 NGLY1Q96IV0 654 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 CETN3O15182 167 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 ZBTB22O15209 634 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 UFL1O94874 794 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 ZNF18P17022 549 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 CXCR5P32302 372 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 PPARDQ03181 441 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 MYOCDQ8IZQ8 938 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 ARFGAP2Q8N6H7 521 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 AK8Q96MA6 479 aa11.18□□□□□ -0.62
SEMA6A-201ENST00000257414 PRDX5P30044 214 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 BCAS4Q8TDM0 211 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 DYDC1Q8WWB3 177 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 DCP1AQ9NPI6 582 aaPredicted RBP11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 FRMPD2Q68DX3 1309 aaPredicted RBP11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 MYO1CO00159 1063 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 RASSF7Q02833 373 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 LMBR1Q8WVP7 490 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
SEMA6A-201ENST00000257414 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 CEP104O60308 925 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 MOCS3O95396 460 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 INPP5BP32019 993 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 EIF4A3P38919 411 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 CAPS2Q9BXY5 557 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 TRIM10Q9UDY6 481 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 GOLGA6L10A0A0M3HER8 536 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 BMP6P22004 513 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 ATP1A2P50993 1020 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 LRRC41Q15345 812 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 VWA3BQ502W6 1294 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 GSPT2Q8IYD1 628 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 ZNF34Q8IZ26 560 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 TBCKQ8TEA7 893 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 FUT8Q9BYC5 575 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 SUGCTQ9HAC7 445 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 JRKLQ9Y4A0 524 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 ATP1A1P05023 1023 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 CCT5P48643 541 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 TBX2Q13207 712 aaPredicted RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 MAN2A1Q16706 1144 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 TTC19Q6DKK2 380 aaPredicted RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 SYCP3Q8IZU3 236 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 UBLCP1Q8WVY7 318 aaPredicted RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 CPVLQ9H3G5 476 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
SEMA6A-201ENST00000257414 TCRBV5S4A2TA0A5A2 114 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 ANKRD65E5RJM6 399 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 KCNQ4P56696 695 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 RPS6KA1Q15418 735 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 KIAA0753Q2KHM9 967 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 B4GALNT4Q76KP1 1039 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 CNBD1Q8NA66 436 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 BAZ2BQ9UIF8 2168 aaKnown RBP11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 MINPP1Q9UNW1 487 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 GOLGA8KD6RF30 607 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 KIF11P52732 1056 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 LRRC47Q8N1G4 583 aaKnown RBP11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 LRRC37A3O60309 1634 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 SPDYE3A6NKU9 549 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 USP14P54578 494 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 PTPROQ16827 1216 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 FAM26FQ5R3K3 315 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 NDST4Q9H3R1 872 aa11.15□□□□□ -0.62
SEMA6A-201ENST00000257414 SLC7A5Q01650 507 aa11.15□□□□□ -0.63
SEMA6A-201ENST00000257414 GUCY2DQ02846 1103 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms