RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 RPAP1Q9BWH6 1393 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 FAM170AA1A519 330 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 MAFGO15525 162 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 INPP1P49441 399 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 IRAK1P51617 712 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 PSMD6Q15008 389 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 IQCB1Q15051 598 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 NAA35Q5VZE5 725 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 KIRREL3Q8IZU9 778 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CXorf38Q8TB03 319 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 PARD3BQ8TEW8 1205 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 ZNF473Q8WTR7 871 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 UNC45AQ9H3U1 944 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 C6orf50Q9HD87 102 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 SCINQ9Y6U3 715 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 DIAPH2O60879 1101 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 GNAQP50148 359 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 C3orf20Q8ND61 904 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 RILPQ96NA2 401 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
TRPM1-201ENST00000256552 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
TRPM1-201ENST00000256552 DDR1Q08345 913 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 VCPKMTQ9H867 229 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 NHEJ1Q9H9Q4 299 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 HDAC6Q9UBN7 1215 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 PTPRTO14522 1441 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 CYP27A1Q02318 531 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 CUL4BQ13620 913 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 EPN3Q9H201 632 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 SUGCTQ9HAC7 445 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ZFATQ9P243 1243 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 GPAA1O43292 621 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 MMEP08473 750 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ADCY1Q08828 1119 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 PPP2R5EQ16537 467 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ST13P4Q8IZP2 240 aaPredicted RBP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 LRRC8CQ8TDW0 803 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 BTBD18B2RXH4 712 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 E2F6O75461 281 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 TAF5LO75529 589 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 CHGBP05060 677 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 SLCO1A2P46721 670 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 IL9RQ01113 521 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ROR2Q01974 943 aaKnown RBP11.18□□□□□ -0.62
TRPM1-201ENST00000256552 IDI1Q13907 227 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 MAGEB6Q8N7X4 407 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 EEF2KMTQ96G04 330 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 EHMT1Q9H9B1 1298 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 TMEM165Q9HC07 324 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 HPCAL4Q9UM19 191 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 TSC22D4Q9Y3Q8 395 aa11.18□□□□□ -0.62
TRPM1-201ENST00000256552 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 ACEP12821 1306 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 DYMQ7RTS9 669 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 KCNH5Q8NCM2 988 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 CCT6BQ92526 530 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 OLFM3Q96PB7 478 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 TEX13AQ9BXU3 409 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 RNF14Q9UBS8 474 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 FTCDO95954 541 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 RPN1P04843 607 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 MSH2P43246 934 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 ZNF449Q6P9G9 518 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 FOXR1Q6PIV2 292 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 TRMT1LQ7Z2T5 733 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 ANKLE2Q86XL3 938 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 U2AF1L4Q8WU68 220 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 EAF2Q96CJ1 260 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 GSDMAQ96QA5 445 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 SNRPA1P09661 255 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 EPB41P11171 864 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 ATP5JP18859 108 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 YY1P25490 414 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 RPL13P26373 211 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 RRP36Q96EU6 259 aaKnown RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 TUBGCP2Q9BSJ2 902 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 CCDC68Q9H2F9 335 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 MMADHCQ9H3L0 296 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-201ENST00000256552 THAP12O43422 761 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 PPP1R37O75864 691 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 GNAT2P19087 354 aa11.17□□□□□ -0.62
TRPM1-201ENST00000256552 HS2ST1Q7LGA3 356 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms