RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 MYO1FO00160 1098 aa17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 KRT14P02533 472 aa17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 MYZAPP0CAP1 466 aa17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 PNMA8AQ86V59 439 aaPredicted RBP17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 LPIN2Q92539 896 aa17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 CXorf56Q9H5V9 222 aa17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
SLC6A8-201ENST00000253122 PPP1R3GB7ZBB8 358 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 PDE8BO95263 885 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 RPSAP08865 295 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 BCAMP50895 628 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 TNNC1P63316 161 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 SGMS1Q86VZ5 419 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 SPAG5Q96R06 1193 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 JAG2Q9Y219 1238 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 CALM1P0DP23 149 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 CALM2P0DP24 149 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 CALM3P0DP25 149 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 EZH2Q15910 746 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 TCERG1LQ5VWI1 586 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 STIM2Q9P246 746 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 CEP104O60308 925 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 EIF4A3P38919 411 aaKnown RBP17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 SLC39A2Q9NP94 309 aa17.62■□□□□ 0.41
SLC6A8-201ENST00000253122 LGALS16A8MUM7 142 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 EIF3HO15372 352 aaKnown RBP eCLIP17.61■□□□□ 0.414e-12■□□□□ 10.5
SLC6A8-201ENST00000253122 MDM2Q00987 491 aaPredicted RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 EHHADHQ08426 723 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 DPYDQ12882 1025 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.414e-9■□□□□ 9.3
SLC6A8-201ENST00000253122 LACRTQ9GZZ8 138 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 EHD2Q9NZN4 543 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 HGSO14964 777 aaPredicted RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 NR1D1P20393 614 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 EEF1GP26641 437 aaKnown RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 ZBED6P86452 979 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 MAP2K1Q02750 393 aaPredicted RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 DMGDHQ9UI17 866 aaKnown RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 WDR19Q8NEZ3 1342 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 FTCDO95954 541 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 CALRP27797 417 aaKnown RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 NTRK3Q16288 839 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 INF2Q27J81 1249 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 CAVIN4Q5BKX8 364 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 TRAPPC11Q7Z392 1133 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 SPATA4Q8NEY3 305 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 ZSCAN10Q96SZ4 725 aaPredicted RBP17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 ODF2LQ9ULJ1 636 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 LTBP4Q8N2S1 1624 aa17.61■□□□□ 0.41
SLC6A8-201ENST00000253122 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 UBA5Q9GZZ9 404 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 LIMA1Q9UHB6 759 aaKnown RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 TRAF5O00463 557 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 SYF2O95926 243 aaKnown RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 SARSP49591 514 aaKnown RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 PP2D1A8MPX8 630 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 BACH1O14867 736 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 ECM2O94769 699 aaPredicted RBP17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 BICDL1Q6ZP65 573 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 ARL8AQ96BM9 186 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 UIMC1Q96RL1 719 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 UBXN6Q9BZV1 441 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 MRC1P22897 1456 aa17.6■□□□□ 0.41
SLC6A8-201ENST00000253122 NEBLO76041 1014 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 SEC24CP53992 1094 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 KRT71Q3SY84 523 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 N4BP2L2Q92802 583 aaPredicted RBP17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 GEMIN8Q9NWZ8 242 aaKnown RBP17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 PCDHA13Q9Y5I0 950 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 PHLPP1O60346 1717 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 TARSL2A2RTX5 802 aaKnown RBP17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 USP17L12C9JPN9 530 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 USP17L21D6R901 530 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 KLK7P49862 253 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 ZBTB38Q8NAP3 1195 aaPredicted RBP17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 SPATA31A1Q5TZJ5 1347 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 A0A087X0B3 334 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 PSMD14O00487 310 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 KIF11P52732 1056 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 NAPAP54920 295 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 EMBQ6PCB8 327 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 FAM212AQ96EL1 285 aa17.59■□□□□ 0.41
SLC6A8-201ENST00000253122 ABCA3Q99758 1704 aa17.58■□□□□ 0.41
SLC6A8-201ENST00000253122 RNF225M0QZC1 329 aaPredicted RBP17.58■□□□□ 0.41
SLC6A8-201ENST00000253122 SLC9C1Q4G0N8 1177 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms