RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 USP17L10C9JJH3 530 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 RAD21O60216 631 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 STX10O60499 249 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 RBL2Q08999 1139 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 STYK1Q6J9G0 422 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 SH3BP5LQ7L8J4 393 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 SLC37A4O43826 429 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 TDP2O95551 362 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 UBE2SQ16763 222 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 AOC3Q16853 763 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 FILIP1LQ4L180 1135 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 ZSCAN29Q8IWY8 852 aaPredicted RBP24.41■■□□□ 1.5
CLN6-201ENST00000249806 ADSSL1Q8N142 457 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 MAP7D2Q96T17 732 aa24.41■■□□□ 1.5
CLN6-201ENST00000249806 MMTAG2Q9BU76 263 aaKnown RBP24.41■■□□□ 1.5
CLN6-201ENST00000249806 MTMR9Q96QG7 549 aa24.4■■□□□ 1.5
CLN6-201ENST00000249806 VPS16Q9H269 839 aa24.4■■□□□ 1.5
CLN6-201ENST00000249806 GREB1LQ9C091 1923 aaPredicted RBP24.4■■□□□ 1.5
CLN6-201ENST00000249806 LRRC10BA6NIK2 292 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 PMS1P54277 932 aaKnown RBP24.39■■□□□ 1.5
CLN6-201ENST00000249806 NCBP1Q09161 790 aaKnown RBP24.39■■□□□ 1.5
CLN6-201ENST00000249806 KCNB1Q14721 858 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 CCDC17Q96LX7 622 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 ARID3AQ99856 593 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 MRIQ9BWK5 157 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 LIMA1Q9UHB6 759 aaKnown RBP24.39■■□□□ 1.5
CLN6-201ENST00000249806 PPP2R2CQ9Y2T4 447 aa24.39■■□□□ 1.5
CLN6-201ENST00000249806 SIPA1L1O43166 1804 aa24.39■■□□□ 1.49
CLN6-201ENST00000249806 AKR1B15C9JRZ8 316 aaPredicted RBP24.39■■□□□ 1.49
CLN6-201ENST00000249806 CCP110O43303 1012 aa24.39■■□□□ 1.49
CLN6-201ENST00000249806 GPATCH4Q5T3I0 446 aaKnown RBP24.39■■□□□ 1.49
CLN6-201ENST00000249806 TOGARAM2Q6ZUX3 1019 aa24.39■■□□□ 1.49
CLN6-201ENST00000249806 N4BP3O15049 544 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 RHOBTB3O94955 611 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 MYL1P05976 194 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 EEF2P13639 858 aaKnown RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 TNNI2P48788 182 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 CALCRLQ16602 461 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 CERKLQ49MI3 558 aaPredicted RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 TCP11X2Q5H9J9 407 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 TRIM65Q6PJ69 517 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 MTERF4Q7Z6M4 381 aaKnown RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 ANKRD7Q92527 254 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 DHX36Q9H2U1 1008 aaKnown RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 RIC8AQ9NPQ8 531 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 PI4KBQ9UBF8 816 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 ZNF215Q9UL58 517 aaPredicted RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 KCNJ18B7U540 433 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 ETF1P62495 437 aaKnown RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 KCNJ12Q14500 433 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
CLN6-201ENST00000249806 PPFIBP1Q86W92 1011 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 FCHSD1Q86WN1 690 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 IDI2Q9BXS1 227 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 CUEDC2Q9H467 287 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 TAB2Q9NYJ8 693 aa24.38■■□□□ 1.49
CLN6-201ENST00000249806 ZBTB5O15062 677 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 IRF2BP1Q8IU81 584 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 GIMAP8Q8ND71 665 aaPredicted RBP24.37■■□□□ 1.49
CLN6-201ENST00000249806 TRIM9Q9C026 710 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 COPB1P53618 953 aaKnown RBP24.37■■□□□ 1.49
CLN6-201ENST00000249806 FKBP1AP62942 108 aaKnown RBP24.37■■□□□ 1.49
CLN6-201ENST00000249806 MTF1Q14872 753 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 C7orf43Q8WVR3 580 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 DNAI1Q9UI46 699 aa24.37■■□□□ 1.49
CLN6-201ENST00000249806 ZSCAN12O43309 604 aa24.36■■□□□ 1.49
CLN6-201ENST00000249806 RXRBP28702 533 aa24.36■■□□□ 1.49
CLN6-201ENST00000249806 CASP14P31944 242 aa24.36■■□□□ 1.49
CLN6-201ENST00000249806 HDLBPQ00341 1268 aaKnown RBP24.36■■□□□ 1.49
CLN6-201ENST00000249806 ORC2Q13416 577 aaPredicted RBP24.36■■□□□ 1.49
CLN6-201ENST00000249806 TDRD3Q9H7E2 651 aaKnown RBP24.36■■□□□ 1.49
CLN6-201ENST00000249806 LRWD1Q9UFC0 647 aa24.36■■□□□ 1.49
CLN6-201ENST00000249806 H7C1D1 291 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 CLK2P49760 499 aaKnown RBP24.35■■□□□ 1.49
CLN6-201ENST00000249806 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 SIAH1Q8IUQ4 282 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 MTMR8Q96EF0 704 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 PANX2Q96RD6 677 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 DESI2Q9BSY9 194 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 SOWAHDA6NJG2 315 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 FANCGO15287 622 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 GYPCP04921 128 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 SEPT2Q15019 361 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 CUL5Q93034 780 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 CNKSR1Q969H4 720 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 CALML4Q96GE6 196 aa24.35■■□□□ 1.49
CLN6-201ENST00000249806 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.35■■□□□ 1.49
CLN6-201ENST00000249806 V9GYY5 206 aaPredicted RBP24.35■■□□□ 1.49
CLN6-201ENST00000249806 POTEMA6NI47 508 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 FXR1P51114 621 aaKnown RBP eCLIP24.34■■□□□ 1.49
CLN6-201ENST00000249806 SPAG1Q07617 926 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 GRB10Q13322 594 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 PPP1R18Q6NYC8 613 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 PSTPIP2Q9H939 334 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 MAGEF1Q9HAY2 307 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 SERPINA10Q9UK55 444 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 ZNF646O15015 1829 aaPredicted RBP24.34■■□□□ 1.49
CLN6-201ENST00000249806 SLC1A4P43007 532 aa24.34■■□□□ 1.49
CLN6-201ENST00000249806 FXR2P51116 673 aaKnown RBP eCLIP24.34■■□□□ 1.49
CLN6-201ENST00000249806 ASIC1P78348 528 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms