RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CNPY2Q9Y2B0 182 aa28.34■■■□□ 2.13
SDF2L1-201ENST00000248958 ABCB11O95342 1321 aa28.34■■■□□ 2.13
SDF2L1-201ENST00000248958 SEPT4O43236 478 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 CALM1P0DP23 149 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 CALM2P0DP24 149 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 CALM3P0DP25 149 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 KIF5BP33176 963 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 LHX8Q68G74 356 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 NSMFQ6X4W1 530 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 TRPV1Q8NER1 839 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 CTCFLQ8NI51 663 aaPredicted RBP28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 NUP133Q8WUM0 1156 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 VAT1LQ9HCJ6 419 aa28.33■■■□□ 2.13
SDF2L1-201ENST00000248958 PDE4DIPQ5VU43 2346 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 EIF5BO60841 1220 aaKnown RBP28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 TRAF1Q13077 416 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 QRICH1Q2TAL8 776 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 UBE2Q1Q7Z7E8 422 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 SGMS1Q86VZ5 419 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 FBXO11Q86XK2 927 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 MTMR8Q96EF0 704 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 RIOX1Q9H6W3 641 aa28.32■■■□□ 2.12
SDF2L1-201ENST00000248958 ASB14A6NK59 587 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 GNAQP50148 359 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 EXOSC10Q01780 885 aaKnown RBP28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 ADCK5Q3MIX3 580 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 RGS22Q8NE09 1264 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 CLEC4DQ8WXI8 215 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 LZTS2Q9BRK4 669 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 ADD3Q9UEY8 706 aaKnown RBP28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 SLC12A7Q9Y666 1083 aa28.31■■■□□ 2.12
SDF2L1-201ENST00000248958 BRCA2P51587 3418 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 LOC102724159A0A0B4J2E5 919 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 NFIBO00712 420 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 SMARCA1P28370 1054 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 PWP2Q15269 919 aaKnown RBP28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 USH1GQ495M9 461 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 PRAMEF19Q5SWL8 479 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 SYNE3Q6ZMZ3 975 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 RNF207Q6ZRF8 634 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 FGD4Q96M96 766 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 AMNQ9BXJ7 453 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 GPHNQ9NQX3 736 aaPredicted RBP28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 SNX14Q9Y5W7 946 aa28.3■■■□□ 2.12
SDF2L1-201ENST00000248958 ZBTB5O15062 677 aa28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 CNTN2Q02246 1040 aa28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 BAATQ14032 418 aaPredicted RBP28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 NECAB2Q7Z6G3 386 aa28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 HTATIP2Q9BUP3 242 aa28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 ABHD16BQ9H3Z7 469 aa28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 MRPL11Q9Y3B7 192 aaKnown RBP28.29■■■□□ 2.12
SDF2L1-201ENST00000248958 PTPDC1A2A3K4 754 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 SOWAHBA6NEL2 793 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 SNAI1O95863 264 aaPredicted RBP28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 AKR1A1P14550 325 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 TAL1P17542 331 aaPredicted RBP28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 PSMA5P28066 241 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 COL9A3Q14050 684 aaPredicted RBP28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 ARMCX2Q7L311 632 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 MCF2L2Q86YR7 1114 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 LRRC2Q9BYS8 371 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 MCM3APO60318 1980 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 LCTP09848 1927 aa28.28■■■□□ 2.12
SDF2L1-201ENST00000248958 ZNF865P0CJ78 1059 aaPredicted RBP28.27■■■□□ 2.12
SDF2L1-201ENST00000248958 MYL10Q9BUA6 226 aa28.27■■■□□ 2.12
SDF2L1-201ENST00000248958 USP26Q9BXU7 913 aa28.27■■■□□ 2.12
SDF2L1-201ENST00000248958 BLOC1S2Q6QNY1 142 aa28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 CCDC144CPQ8IYA2 1237 aa28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 ARRDC4Q8NCT1 418 aa28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 JAKMIP1Q96N16 626 aaKnown RBP28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 MPHOSPH6Q99547 160 aaKnown RBP28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 SPZ1Q9BXG8 430 aa28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 FAM184BQ9ULE4 1060 aa28.26■■■□□ 2.11
SDF2L1-201ENST00000248958 RPS6P62753 249 aaKnown RBP28.25■■■□□ 2.11
SDF2L1-201ENST00000248958 ACVR2BQ13705 512 aa28.25■■■□□ 2.11
SDF2L1-201ENST00000248958 DNERQ8NFT8 737 aa28.25■■■□□ 2.11
SDF2L1-201ENST00000248958 PAWRQ96IZ0 340 aaKnown RBP28.25■■■□□ 2.11
SDF2L1-201ENST00000248958 PNMA6FA0A0J9YX94 578 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 CYTH3O43739 400 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 RARBP10826 455 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 CALML3P27482 149 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 FGD1P98174 961 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 HOMER1Q86YM7 354 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 SAMD3Q8N6K7 520 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 MORC4Q8TE76 937 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 PIGSQ96S52 555 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 C11orf49Q9H6J7 331 aa28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 MAP3K20Q9NYL2 800 aaKnown RBP28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 ZHX1Q9UKY1 873 aaPredicted RBP28.24■■■□□ 2.11
SDF2L1-201ENST00000248958 B4DLN1 442 aa28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 MNX1P50219 401 aaPredicted RBP28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 ALDH5A1P51649 535 aaPredicted RBP28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 MRPL12P52815 198 aaKnown RBP28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 SLC30A10Q6XR72 485 aa28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 FANCBQ8NB91 859 aa28.23■■■□□ 2.11
SDF2L1-201ENST00000248958 DNM1LO00429 736 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 RCAN1P53805 252 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 SLC35G1Q2M3R5 365 aa28.22■■■□□ 2.11
SDF2L1-201ENST00000248958 APOA5Q6Q788 366 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms