RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
NPC2-201ENST00000238633 ARNTL2Q8WYA1 636 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 KANSL2Q9H9L4 492 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 STK25O00506 426 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
NPC2-201ENST00000238633 CHGBP05060 677 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 MRE11P49959 708 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 TNFAIP2Q03169 654 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 FSCN1Q16658 493 aaKnown RBP11.24□□□□□ -0.61
NPC2-201ENST00000238633 C16orf86Q6ZW13 317 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 TMEM57Q8N5G2 664 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
NPC2-201ENST00000238633 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
NPC2-201ENST00000238633 USP34Q70CQ2 3546 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 GBF1Q92538 1859 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 SOWAHBA6NEL2 793 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 USP17L21D6R901 530 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 RAD21O60216 631 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 CABYRO75952 493 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 NDUFB10O96000 172 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 CYP2C9P11712 490 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 SMPD1P17405 629 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 CPXCR1Q8N123 301 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 ANKRD35Q8N283 1001 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 FAM133AQ8N9E0 248 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 SNX27Q96L92 541 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
NPC2-201ENST00000238633 SLC38A10Q9HBR0 1119 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
NPC2-201ENST00000238633 TRMT13Q9NUP7 481 aaKnown RBP11.23□□□□□ -0.61
NPC2-201ENST00000238633 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
NPC2-201ENST00000238633 LRRC37A2A6NM11 1700 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 PRR33A8MZF0 331 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 F5H6K3 240 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 DYNC1LI2O43237 492 aaPredicted RBP11.22□□□□□ -0.61
NPC2-201ENST00000238633 MBD4O95243 580 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 KLRC3Q07444 240 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 TLK2Q86UE8 772 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 AACSQ86V21 672 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 PRPF38AQ8NAV1 312 aaKnown RBP11.22□□□□□ -0.61
NPC2-201ENST00000238633 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
NPC2-201ENST00000238633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.21□□□□□ -0.61
NPC2-201ENST00000238633 GOLIM4O00461 696 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 ZBED4O75132 1171 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 NHLH1Q02575 133 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.61
NPC2-201ENST00000238633 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 CTR9Q6PD62 1173 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.61
NPC2-201ENST00000238633 HERC6Q8IVU3 1022 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 PHOSPHO2Q8TCD6 241 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 ANKS1AQ92625 1134 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
NPC2-201ENST00000238633 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
NPC2-201ENST00000238633 CFAP54Q96N23 3096 aa11.21□□□□□ -0.62
NPC2-201ENST00000238633 NAV1Q8NEY1 1877 aa11.21□□□□□ -0.62
NPC2-201ENST00000238633 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
NPC2-201ENST00000238633 PFKMP08237 780 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 GJD3Q8N144 294 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.2□□□□□ -0.62
NPC2-201ENST00000238633 PPP1R13LQ8WUF5 828 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 NYAP2Q9P242 653 aa11.2□□□□□ -0.62
NPC2-201ENST00000238633 ZNF536O15090 1300 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 TNKSO95271 1327 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 RASA1P20936 1047 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 ADD2P35612 726 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 GPNMBQ14956 572 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
NPC2-201ENST00000238633 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 DNAJC2Q99543 621 aaKnown RBP11.19□□□□□ -0.62
NPC2-201ENST00000238633 UBE2ZQ9H832 354 aaPredicted RBP11.19□□□□□ -0.62
NPC2-201ENST00000238633 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 A1CFQ9NQ94 594 aaKnown RBP11.19□□□□□ -0.62
NPC2-201ENST00000238633 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NPC2-201ENST00000238633 Q9Y3F1 56 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms