RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 FBXL6Q8N531 539 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 CCDC155Q8N6L0 562 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 FBXO22Q8NEZ5 403 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 VWCEQ96DN2 955 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 POLR3EQ9NVU0 708 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 ADCY6O43306 1168 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 PARNO95453 639 aaKnown RBP11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 PSMC6P62333 389 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 RNF135Q8IUD6 432 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 BANK1Q8NDB2 785 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 TRMT13Q9NUP7 481 aaKnown RBP11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
NDUFB3-201ENST00000237889 SMCHD1A6NHR9 2005 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 LCHNA4D1U4 455 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 USP17L12C9JPN9 530 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 USP17L21D6R901 530 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 PROB1E7EW31 1015 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 GJB5O95377 273 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 GABPAQ06546 454 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 FAM47CQ5HY64 1035 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 CHST13Q8NET6 341 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 SAMD11Q96NU1 681 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 SLF1Q9BQI6 1058 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 KANSL2Q9H9L4 492 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 FBXO28Q9NVF7 368 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 FAM86C1Q9NVL1 165 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 INSL6Q9Y581 213 aa11.65□□□□□ -0.54
NDUFB3-201ENST00000237889 USP34Q70CQ2 3546 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 ABHD14A-ACY1A0A1B0GW23 586 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 CPT1AP50416 773 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 SMAD2Q15796 467 aaKnown RBP11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 ZNF512BQ96KM6 892 aaPredicted RBP11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 CLDND1Q9NY35 253 aa11.64□□□□□ -0.55
NDUFB3-201ENST00000237889 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 KPNA6O60684 536 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 CLCN6P51797 869 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 IKBKEQ14164 716 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 NFRKBQ6P4R8 1299 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 NSUN3Q9H649 340 aaKnown RBP11.63□□□□□ -0.55
NDUFB3-201ENST00000237889 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 STXBP3O00186 592 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 GNAI3P08754 354 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 SMPD1P17405 629 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 ZAP70P43403 619 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 OAZ1P54368 228 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 SPRED2Q7Z698 418 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 SIAH1Q8IUQ4 282 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 CAGE1Q8TC20 777 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 AFAP1L1Q8TED9 768 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 RIPK3Q9Y572 518 aa11.62□□□□□ -0.55
NDUFB3-201ENST00000237889 ASTN1O14525 1302 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 RAD50Q92878 1312 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 H0Y858 1186 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 MYL3P08590 195 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 AVPR2P30518 371 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 ZXDAP98168 799 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 TCEAL5Q5H9L2 206 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 KIAA1211Q6ZU35 1233 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 KATNBL1Q9H079 304 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 PIH1D3Q9NQM4 214 aaKnown RBP11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 TLR9Q9NR96 1032 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
NDUFB3-201ENST00000237889 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
NDUFB3-201ENST00000237889 KDM4AO75164 1064 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms