RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 KRT25Q7Z3Z0 450 aa21.23■□□□□ 0.99
SNX17-201ENST00000233575 PRPF38AQ8NAV1 312 aaKnown RBP21.23■□□□□ 0.99
SNX17-201ENST00000233575 OTUD5Q96G74 571 aa21.23■□□□□ 0.99
SNX17-201ENST00000233575 NR1I2O75469 434 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 NONOQ15233 471 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX17-201ENST00000233575 ZSCAN23Q3MJ62 389 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 WNK4Q96J92 1243 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 ZNF536O15090 1300 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 RLFQ13129 1914 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 MEIS2O14770 477 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 IRF6O14896 467 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 MRPL12P52815 198 aaKnown RBP21.22■□□□□ 0.99
SNX17-201ENST00000233575 TBCKQ8TEA7 893 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 P2RX7Q99572 595 aaKnown RBP21.22■□□□□ 0.99
SNX17-201ENST00000233575 FBXO2Q9UK22 296 aaPredicted RBP21.22■□□□□ 0.99
SNX17-201ENST00000233575 PPP1R9AQ9ULJ8 1098 aa21.22■□□□□ 0.99
SNX17-201ENST00000233575 A0A1B0GVL5 298 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 FSIP1Q8NA03 581 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 AGBL1Q96MI9 1066 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 A0A1W2PQ27 194 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 A0A1W2PQ64 194 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 A0A1W2PQD8 194 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 EDIL3O43854 480 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 PTGDRQ13258 359 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 SHC4Q6S5L8 630 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 LDHDQ86WU2 507 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 TMOD4Q9NZQ9 345 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 CEP131Q9UPN4 1083 aa21.21■□□□□ 0.99
SNX17-201ENST00000233575 LETM2Q2VYF4 491 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 SH3D19Q5HYK7 790 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 SPECC1Q5M775 1068 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 ARMC9Q7Z3E5 817 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 KRI1Q8N9T8 703 aaKnown RBP21.2■□□□□ 0.98
SNX17-201ENST00000233575 TBC1D5Q92609 795 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 ATG4CQ96DT6 458 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 SLC38A10Q9HBR0 1119 aa21.2■□□□□ 0.98
SNX17-201ENST00000233575 DCAF8L1A6NGE4 600 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 SPDYE5A6NIY4 337 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 PTPREP23469 700 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 ERO1BQ86YB8 467 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 CPXCR1Q8N123 301 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 MRPS27Q92552 414 aaKnown RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 MYH7BA7E2Y1 1941 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 HOXA13P31271 388 aaPredicted RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 NDUFA8P51970 172 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 ATP2C1P98194 919 aaPredicted RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 PPATQ06203 517 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 SNW1Q13573 536 aaKnown RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 TREML2Q5T2D2 321 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 LDLRAD1Q5T700 205 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 C4orf32Q8N8J7 132 aa21.19■□□□□ 0.98
SNX17-201ENST00000233575 RBM46Q8TBY0 533 aaKnown RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 RAVER2Q9HCJ3 691 aaKnown RBP21.19■□□□□ 0.98
SNX17-201ENST00000233575 SYCE3A1L190 88 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 CUTAO60888 179 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 ICAM1P05362 532 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 GSE1Q14687 1217 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 ENGASEQ8NFI3 743 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 OPTNQ96CV9 577 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 TMEM60Q9H2L4 133 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 CCPG1Q9ULG6 757 aa21.18■□□□□ 0.98
SNX17-201ENST00000233575 SRPRBQ9Y5M8 271 aaKnown RBP21.18■□□□□ 0.98
SNX17-201ENST00000233575 COL11A1P12107 1806 aaPredicted RBP21.18■□□□□ 0.98
SNX17-201ENST00000233575 VWA5AO00534 786 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 CCNT1O60563 726 aaKnown RBP21.17■□□□□ 0.98
SNX17-201ENST00000233575 CMA1P23946 247 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 CCDC183Q5T5S1 534 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 CATSPERGQ6ZRH7 1159 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 IL17AQ16552 155 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 CAMK4Q16566 473 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 CCDC73Q6ZRK6 1079 aa21.17■□□□□ 0.98
SNX17-201ENST00000233575 SYAP1Q96A49 352 aaPredicted RBP21.17■□□□□ 0.98
SNX17-201ENST00000233575 PFKFB1P16118 471 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 GJA5P36382 358 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 FAM160A1Q05DH4 1040 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 FMR1NBQ8N0W7 255 aaPredicted RBP21.16■□□□□ 0.98
SNX17-201ENST00000233575 ANO3Q9BYT9 981 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 CSRNP2Q9H175 543 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 GLT8D2Q9H1C3 349 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 LOC285556D6RIA3 1793 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 A0A0G2JLL6 359 aaPredicted RBP21.16■□□□□ 0.98
SNX17-201ENST00000233575 TDP2O95551 362 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 BMP15O95972 392 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 CFBP00751 764 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 DSG3P32926 999 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 RESP18Q5W5W9 173 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 USP49Q70CQ1 688 aa21.16■□□□□ 0.98
SNX17-201ENST00000233575 PRRT2Q7Z6L0 340 aaPredicted RBP21.16■□□□□ 0.98
SNX17-201ENST00000233575 MORC2Q9Y6X9 1032 aaPredicted RBP21.16■□□□□ 0.98
SNX17-201ENST00000233575 COG2Q14746 738 aa21.15■□□□□ 0.98
SNX17-201ENST00000233575 GADL1Q6ZQY3 521 aa21.15■□□□□ 0.98
SNX17-201ENST00000233575 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
SNX17-201ENST00000233575 MRPL11Q9Y3B7 192 aaKnown RBP21.15■□□□□ 0.98
SNX17-201ENST00000233575 ABCB11O95342 1321 aa21.14■□□□□ 0.98
SNX17-201ENST00000233575 VWA3AA6NCI4 1184 aa21.14■□□□□ 0.98
SNX17-201ENST00000233575 NFIBO00712 420 aa21.14■□□□□ 0.98
SNX17-201ENST00000233575 CELF2O95319 508 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms