RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ADM5C9JUS6 153 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 POLR2DO15514 142 aaKnown RBP23.15■■□□□ 1.3
SNX3-201ENST00000230085 MFAP3LO75121 409 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 EIF3JO75822 258 aaKnown RBP23.15■■□□□ 1.3
SNX3-201ENST00000230085 PRAMEF18Q5VWM3 479 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 TRIM22Q8IYM9 498 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 GSDMAQ96QA5 445 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 DEFB129Q9H1M3 183 aa23.15■■□□□ 1.3
SNX3-201ENST00000230085 LRRC10BA6NIK2 292 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 B4E1Z4 1266 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 PRKAB2O43741 272 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 RASA3Q14644 834 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 CERS3Q8IU89 383 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 ZFPM1Q8IX07 1006 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 NEK11Q8NG66 645 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 CDK5RAP2Q96SN8 1893 aa23.14■■□□□ 1.3
SNX3-201ENST00000230085 CNTNAP1P78357 1384 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.29
SNX3-201ENST00000230085 PRR29P0C7W0 189 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 ACTN2P35609 894 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 TNFAIP1Q13829 316 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 TRIM14Q14142 442 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 FKBP1CQ5VVH2 108 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 RAD9BQ6WBX8 426 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 PPFIBP1Q86W92 1011 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 TMTC1Q8IUR5 882 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 NKX2-3Q8TAU0 364 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 SDR42E1Q8WUS8 393 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 TMEM39BQ9GZU3 492 aa23.14■■□□□ 1.29
SNX3-201ENST00000230085 IVLP07476 585 aa23.13■■□□□ 1.29
SNX3-201ENST00000230085 MAPKAPK5Q8IW41 473 aa23.13■■□□□ 1.29
SNX3-201ENST00000230085 SLC26A6Q9BXS9 759 aa23.13■■□□□ 1.29
SNX3-201ENST00000230085 SENP2Q9HC62 589 aa23.13■■□□□ 1.29
SNX3-201ENST00000230085 SAMSN1Q9NSI8 373 aaKnown RBP23.13■■□□□ 1.29
SNX3-201ENST00000230085 BTBD18B2RXH4 712 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 H3BQF6 201 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 TRAF5O00463 557 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 WDR93Q6P2C0 686 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 SMC1BQ8NDV3 1235 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
SNX3-201ENST00000230085 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 CRNKL1Q9BZJ0 848 aaKnown RBP23.12■■□□□ 1.29
SNX3-201ENST00000230085 VIPAS39Q9H9C1 493 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 ITGBL1O95965 494 aaPredicted RBP23.12■■□□□ 1.29
SNX3-201ENST00000230085 TNNI2P48788 182 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 NFXL1Q6ZNB6 911 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 FAM83AQ86UY5 434 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 CDAN1Q8IWY9 1227 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 IGSF22Q8N9C0 903 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 FERMT2Q96AC1 680 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 EPC1Q9H2F5 836 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 SLC4A4Q9Y6R1 1079 aa23.12■■□□□ 1.29
SNX3-201ENST00000230085 SYNRGQ9UMZ2 1314 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 CTAGE9A4FU28 777 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 FILIP1LQ4L180 1135 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 AKNAD1Q5T1N1 836 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 FAM177A1Q8N128 213 aaPredicted RBP23.11■■□□□ 1.29
SNX3-201ENST00000230085 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
SNX3-201ENST00000230085 PYM1Q9BRP8 204 aaKnown RBP23.11■■□□□ 1.29
SNX3-201ENST00000230085 ZCCHC17Q9NP64 241 aaKnown RBP23.11■■□□□ 1.29
SNX3-201ENST00000230085 MED4Q9NPJ6 270 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 ZSWIM5Q9P217 1185 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 LIMA1Q9UHB6 759 aaKnown RBP23.11■■□□□ 1.29
SNX3-201ENST00000230085 FLT1P17948 1338 aa23.11■■□□□ 1.29
SNX3-201ENST00000230085 SOWAHDA6NJG2 315 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 ENTPD3O75355 529 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 GNAT2P19087 354 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 RTN1Q16799 776 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 ZNF662Q6ZS27 426 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 FAM151AQ8WW52 585 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 DESI2Q9BSY9 194 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 RNF26Q9BY78 433 aaPredicted RBP23.1■■□□□ 1.29
SNX3-201ENST00000230085 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
SNX3-201ENST00000230085 A0A0U1RQG5 324 aaPredicted RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 SPAG1Q07617 926 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 RBL2Q08999 1139 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 SART3Q15020 963 aaKnown RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 FAM71BQ8TC56 605 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 TEPSINQ96N21 525 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 MKRN1Q9UHC7 482 aaKnown RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 GSG1L2A8MUP6 293 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 NPM3O75607 178 aaKnown RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 GRIN1Q05586 938 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 DPYDQ12882 1025 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 MTF1Q14872 753 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 KARSQ15046 597 aaKnown RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 SH3BP5LQ7L8J4 393 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 IFNL3Q8IZI9 196 aa23.09■■□□□ 1.29
SNX3-201ENST00000230085 EPB41L4AQ9HCS5 686 aaPredicted RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 DCP1AQ9NPI6 582 aaPredicted RBP23.09■■□□□ 1.29
SNX3-201ENST00000230085 DDTLA6NHG4 134 aaPredicted RBP23.08■■□□□ 1.29
SNX3-201ENST00000230085 MYH8P13535 1937 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 AMPD2Q01433 879 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 SEMA3FQ13275 785 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.29
SNX3-201ENST00000230085 NBPF12Q5TAG4 269 aaPredicted RBP23.08■■□□□ 1.29
SNX3-201ENST00000230085 ZSCAN29Q8IWY8 852 aaPredicted RBP23.08■■□□□ 1.29
SNX3-201ENST00000230085 TRMT44Q8IYL2 757 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms