RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
LTBR-201ENST00000228918 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
LTBR-201ENST00000228918 KLRF2D3W0D1 207 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 PSMD14O00487 310 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 PES1O00541 588 aaKnown RBP18.24■□□□□ 0.51
LTBR-201ENST00000228918 GNPATO15228 680 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 ERLIN1O75477 346 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 HERVK_113P62684 666 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 MEA1Q16626 185 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 PTF1AQ7RTS3 328 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 KRT25Q7Z3Z0 450 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 IPO4Q8TEX9 1081 aaKnown RBP18.24■□□□□ 0.51
LTBR-201ENST00000228918 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
LTBR-201ENST00000228918 BTAF1O14981 1849 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 B4DLN1 442 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 H3BQF6 201 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 RHOXF2BP0C7M4 288 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 NAPAP54920 295 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 ST5P78524 1137 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 TXNRD1Q16881 649 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 MAPKAPK5Q8IW41 473 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 CSGALNACT2Q8N6G5 542 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 RHOXF2Q9BQY4 288 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 TUBGCP2Q9BSJ2 902 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 TRIM9Q9C026 710 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 EXOC1Q9NV70 894 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 ANKIB1Q9P2G1 1089 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 CCNE1P24864 410 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 VSNL1P62760 191 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
LTBR-201ENST00000228918 HDXQ7Z353 690 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 TRAPPC11Q7Z392 1133 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 MSL3Q8N5Y2 521 aaKnown RBP18.23■□□□□ 0.51
LTBR-201ENST00000228918 P2RX5Q93086 422 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 RTFDC1Q9BY42 306 aaPredicted RBP18.23■□□□□ 0.51
LTBR-201ENST00000228918 CPVLQ9H3G5 476 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
LTBR-201ENST00000228918 SAP30BPQ9UHR5 308 aaKnown RBP18.23■□□□□ 0.51
LTBR-201ENST00000228918 VGLL3A8MV65 326 aa18.22■□□□□ 0.51
LTBR-201ENST00000228918 NONOQ15233 471 aaKnown RBP eCLIP18.22■□□□□ 0.51
LTBR-201ENST00000228918 TSR1Q2NL82 804 aaKnown RBP18.22■□□□□ 0.51
LTBR-201ENST00000228918 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
LTBR-201ENST00000228918 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
LTBR-201ENST00000228918 NOA1Q8NC60 698 aaKnown RBP18.22■□□□□ 0.51
LTBR-201ENST00000228918 C7orf25Q9BPX7 421 aa18.22■□□□□ 0.51
LTBR-201ENST00000228918 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
LTBR-201ENST00000228918 BICDL2A1A5D9 508 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
LTBR-201ENST00000228918 LDHCP07864 332 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 PDE4DQ08499 809 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 GRAPQ13588 217 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 LETM2Q2VYF4 491 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
LTBR-201ENST00000228918 CCDC47Q96A33 483 aaKnown RBP18.21■□□□□ 0.51
LTBR-201ENST00000228918 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 RETREG2Q8NC44 543 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 CNOT6LQ96LI5 555 aaKnown RBP18.21■□□□□ 0.51
LTBR-201ENST00000228918 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
LTBR-201ENST00000228918 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 TUBBP07437 444 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 ASIC1P78348 528 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 KRT83P78385 493 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 STK4Q13043 487 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 NFIXQ14938 502 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 ANKRD40Q6AI12 368 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 NEK8Q86SG6 692 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 FAM114A1Q8IWE2 563 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 NEK11Q8NG66 645 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 EYA3Q99504 573 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 AGPAT5Q9NUQ2 364 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 TRIM21P19474 475 aaKnown RBP18.2■□□□□ 0.5
LTBR-201ENST00000228918 GNA11P29992 359 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 PPP1R2P41236 205 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 CDK8P49336 464 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 MCM6Q14566 821 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 CCDC122Q5T0U0 273 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 TXLNBQ8N3L3 684 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 NEDD1Q8NHV4 660 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 PDE11AQ9HCR9 933 aa18.2■□□□□ 0.5
LTBR-201ENST00000228918 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
LTBR-201ENST00000228918 CAPN2P17655 700 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 CYLC1P35663 651 aaPredicted RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 BTDP43251 543 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 KLK7P49862 253 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 MMTAG2Q9BU76 263 aaKnown RBP18.19■□□□□ 0.5
LTBR-201ENST00000228918 SUGCTQ9HAC7 445 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 TFR2Q9UP52 801 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
LTBR-201ENST00000228918 ENC1O14682 589 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms