RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 ANKS1AQ92625 1134 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 FLT1P17948 1338 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 PPP4CP60510 307 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 TUBGCP2Q9BSJ2 902 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 KBTBD4Q9NVX7 518 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 SRGAP2O75044 1071 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 MTIF2P46199 727 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 MCM6Q14566 821 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
CNOT3-201ENST00000221232 DUSP9Q99956 384 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 REXO2Q9Y3B8 237 aaKnown RBP16.4■□□□□ 0.22
CNOT3-201ENST00000221232 ITIH6Q6UXX5 1313 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 NDUFA10O95299 355 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 NEK8Q86SG6 692 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 PNKPQ96T60 521 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 ZMYND12Q9H0C1 365 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 TDP2O95551 362 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 IDEP14735 1019 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 SLC16A2P36021 539 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 SCNN1DP51172 638 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 CYP27A1Q02318 531 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 TTI2Q6NXR4 508 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 GIMAP8Q8ND71 665 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-201ENST00000221232 CCDC51Q96ER9 411 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 NAPGQ99747 312 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-201ENST00000221232 TRIM9Q9C026 710 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
CNOT3-201ENST00000221232 SERPINB2P05120 415 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 UBE2SQ16763 222 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 C16orf86Q6ZW13 317 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 CAPZA3Q96KX2 299 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 DUSP10Q9Y6W6 482 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 AHDC1Q5TGY3 1603 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-201ENST00000221232 SCN7AQ01118 1682 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 POTEMA6NI47 508 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 RHBDL3P58872 404 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 LRRC41Q15345 812 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-201ENST00000221232 ZNF287Q9HBT7 754 aa16.38■□□□□ 0.21
CNOT3-201ENST00000221232 GPR75-ASB3A0A0A6YYF3 556 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 GNA11P29992 359 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 SMC1AQ14683 1233 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 LONRF2Q1L5Z9 754 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 TTBK2Q6IQ55 1244 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 WDR59Q6PJI9 974 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 CNOT6LQ96LI5 555 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 ANKZF1Q9H8Y5 726 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 SLC37A4O43826 429 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 TOM1O60784 492 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 AKR1B1P15121 316 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 OAS2P29728 719 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 TNNI2P48788 182 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 DOK7Q18PE1 504 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 NOA1Q8NC60 698 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 P2RX5Q93086 422 aa16.37■□□□□ 0.21
CNOT3-201ENST00000221232 MMTAG2Q9BU76 263 aaKnown RBP16.37■□□□□ 0.21
CNOT3-201ENST00000221232 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 KIF20AO95235 890 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
CNOT3-201ENST00000221232 ST5P78524 1137 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 KCNB1Q14721 858 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 LRWD1Q9UFC0 647 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 LAMB2P55268 1798 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 MACROD2A1Z1Q3 448 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 RCCD1A6NED2 376 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 CALCRLQ16602 461 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 GALNT17Q6IS24 598 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 CEP112Q8N8E3 955 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 CDK5RAP3Q96JB5 506 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 FUT8Q9BYC5 575 aa16.36■□□□□ 0.21
CNOT3-201ENST00000221232 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-201ENST00000221232 RREB1Q92766 1687 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms