RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 TRIM10Q9UDY6 481 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 SAR1BQ9Y6B6 198 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 COL24A1Q17RW2 1714 aa14.9□□□□□ -0.02
SRP54-201ENST00000216774 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 B4DLN1 442 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 OR52Z1P0C646 297 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 GSTO1P78417 241 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 CDK17Q00537 523 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 CABP7Q86V35 215 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 DYNLL2Q96FJ2 89 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 C7orf25Q9BPX7 421 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 SPZ1Q9BXG8 430 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 TRIM9Q9C026 710 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 VIPAS39Q9H9C1 493 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 SPATA31A5Q5VU36 1347 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 SPATA31A7Q8IWB4 1347 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 A0A1W2PQJ5 194 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 TARSL2A2RTX5 802 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 TULP2O00295 520 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 IPO7O95373 1038 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 BAG3O95817 575 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 LDHBP07195 334 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 PLCG1P19174 1290 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 TRIM21P19474 475 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 USP14P54578 494 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 CKAP4Q07065 602 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 ORC2Q13416 577 aaPredicted RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 KIAA1328Q86T90 577 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 NBPF5PQ86XG9 351 aaPredicted RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 ZNF444Q8N0Y2 327 aaPredicted RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 GOLGA5Q8TBA6 731 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 JAKMIP2Q96AA8 810 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 SETDB2Q96T68 719 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
SRP54-201ENST00000216774 MED4Q9NPJ6 270 aa14.89□□□□□ -0.03
SRP54-201ENST00000216774 ANO9A1A5B4 782 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 USP17L3A6NCW0 530 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 USP17L4A6NCW7 530 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 KCNQ2O43526 872 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 PPP4CP60510 307 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 AMPD3Q01432 767 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 TBC1D8BQ0IIM8 1120 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 ZSCAN26Q16670 478 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 HSP90B2PQ58FF3 399 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 USP17L1Q7RTZ2 530 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 ZSCAN29Q8IWY8 852 aaPredicted RBP14.88□□□□□ -0.03
SRP54-201ENST00000216774 FAM71BQ8TC56 605 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 SH3RF3Q8TEJ3 882 aaPredicted RBP14.88□□□□□ -0.03
SRP54-201ENST00000216774 LRRC15Q8TF66 581 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 TMEM47Q9BQJ4 181 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 SUGCTQ9HAC7 445 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 ZNF287Q9HBT7 754 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 VPS18Q9P253 973 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
SRP54-201ENST00000216774 ATP1A1P05023 1023 aaKnown RBP14.87□□□□□ -0.03
SRP54-201ENST00000216774 LMAN1P49257 510 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 GYS2P54840 703 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 NONOQ15233 471 aaKnown RBP eCLIP14.87□□□□□ -0.03
SRP54-201ENST00000216774 TXNRD1Q16881 649 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 SLC4A8Q2Y0W8 1093 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 MAP9Q49MG5 647 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 TXNRD3Q86VQ6 643 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 CNOT6LQ96LI5 555 aaKnown RBP14.87□□□□□ -0.03
SRP54-201ENST00000216774 ERGIC2Q96RQ1 377 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 PLIN2Q99541 437 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 NHEJ1Q9H9Q4 299 aaPredicted RBP14.87□□□□□ -0.03
SRP54-201ENST00000216774 GNA11P29992 359 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 PDE4DQ08499 809 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 TPTE2Q6XPS3 522 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 PURBQ96QR8 312 aaKnown RBP14.87□□□□□ -0.03
SRP54-201ENST00000216774 TSGA10Q9BZW7 698 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 AGPAT5Q9NUQ2 364 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 CWC15Q9P013 229 aaKnown RBP14.87□□□□□ -0.03
SRP54-201ENST00000216774 MYH1P12882 1939 aa14.87□□□□□ -0.03
SRP54-201ENST00000216774 RASSF10A6NK89 507 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 ENC1O14682 589 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 ASIC1P78348 528 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 CNNM4Q6P4Q7 775 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 C6orf50Q9HD87 102 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 HDAC6Q9UBN7 1215 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 STX8Q9UNK0 236 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 NAV1Q8NEY1 1877 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 CCNT1O60563 726 aaKnown RBP14.86□□□□□ -0.03
SRP54-201ENST00000216774 RASA1P20936 1047 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 TM4SF1P30408 202 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 ACTN2P35609 894 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 MTIF2P46199 727 aaKnown RBP14.86□□□□□ -0.03
SRP54-201ENST00000216774 AARSP49588 968 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRP54-201ENST00000216774 NAPAP54920 295 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 STK4Q13043 487 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 MIIPQ5JXC2 388 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 RC3H1Q5TC82 1133 aaKnown RBP14.86□□□□□ -0.03
SRP54-201ENST00000216774 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
SRP54-201ENST00000216774 MMS19Q96T76 1030 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms