RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 C1orf53Q5VUE5 145 aa26.08■■□□□ 1.77
VTI1B-201ENST00000216456 EEPD1Q7L9B9 569 aa26.08■■□□□ 1.77
VTI1B-201ENST00000216456 DEFB123Q8N688 67 aa26.08■■□□□ 1.77
VTI1B-201ENST00000216456 PDGFCQ9NRA1 345 aa26.08■■□□□ 1.77
VTI1B-201ENST00000216456 CYP39A1Q9NYL5 469 aa26.08■■□□□ 1.77
VTI1B-201ENST00000216456 NFIBO00712 420 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 CTAGE5O15320 804 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 ICAM1P05362 532 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 GOLGA8HP0CJ92 632 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 BEX3Q00994 111 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 TKFCQ3LXA3 575 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 BTNL9Q6UXG8 535 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 TICAM2Q86XR7 235 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 STARD7Q9NQZ5 370 aa26.07■■□□□ 1.76
VTI1B-201ENST00000216456 EPHB4P54760 987 aa26.06■■□□□ 1.76
VTI1B-201ENST00000216456 FBXO16Q8IX29 292 aaPredicted RBP26.06■■□□□ 1.76
VTI1B-201ENST00000216456 LCTP09848 1927 aa26.06■■□□□ 1.76
VTI1B-201ENST00000216456 ZNF213O14771 459 aa26.05■■□□□ 1.76
VTI1B-201ENST00000216456 ASGR1P07306 291 aa26.05■■□□□ 1.76
VTI1B-201ENST00000216456 CLTBP09497 229 aa26.05■■□□□ 1.76
VTI1B-201ENST00000216456 GSPT1P15170 499 aaKnown RBP26.05■■□□□ 1.76
VTI1B-201ENST00000216456 BAATQ14032 418 aaPredicted RBP26.05■■□□□ 1.76
VTI1B-201ENST00000216456 TSEN34Q9BSV6 310 aaKnown RBP26.05■■□□□ 1.76
VTI1B-201ENST00000216456 UPF3AQ9H1J1 476 aaKnown RBP26.05■■□□□ 1.76
VTI1B-201ENST00000216456 B4E1Z4 1266 aa26.04■■□□□ 1.76
VTI1B-201ENST00000216456 KDM4AO75164 1064 aa26.04■■□□□ 1.76
VTI1B-201ENST00000216456 GJA9P57773 515 aa26.04■■□□□ 1.76
VTI1B-201ENST00000216456 ZNF543Q08ER8 600 aa26.04■■□□□ 1.76
VTI1B-201ENST00000216456 FAAP100Q0VG06 881 aa26.04■■□□□ 1.76
VTI1B-201ENST00000216456 LRRC37A2A6NM11 1700 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 SNHG28P0DPA3 235 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 MFAP1P55081 439 aaKnown RBP26.03■■□□□ 1.76
VTI1B-201ENST00000216456 TNFAIP2Q03169 654 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 GNASQ5JWF2 1037 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 SLC30A10Q6XR72 485 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 NOL8Q76FK4 1167 aaKnown RBP26.03■■□□□ 1.76
VTI1B-201ENST00000216456 CLEC4DQ8WXI8 215 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 UBA5Q9GZZ9 404 aa26.03■■□□□ 1.76
VTI1B-201ENST00000216456 SMPD1P17405 629 aa26.02■■□□□ 1.76
VTI1B-201ENST00000216456 CST5P28325 142 aaPredicted RBP26.02■■□□□ 1.76
VTI1B-201ENST00000216456 TAPT1Q6NXT6 567 aa26.02■■□□□ 1.76
VTI1B-201ENST00000216456 ESR2Q92731 530 aa26.02■■□□□ 1.76
VTI1B-201ENST00000216456 FAM161BQ96MY7 647 aa26.02■■□□□ 1.76
VTI1B-201ENST00000216456 RNF41Q9H4P4 317 aaPredicted RBP26.02■■□□□ 1.76
VTI1B-201ENST00000216456 GNEQ9Y223 722 aaKnown RBP26.02■■□□□ 1.76
VTI1B-201ENST00000216456 MOXD2PA6NHM9 499 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 ASB14A6NK59 587 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 NUP133Q8WUM0 1156 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 VTI1AQ96AJ9 217 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 TTC14Q96N46 770 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 TMEM39AQ9NV64 488 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 MTMR10Q9NXD2 777 aa26.01■■□□□ 1.75
VTI1B-201ENST00000216456 PTPDC1A2A3K4 754 aa26■■□□□ 1.75
VTI1B-201ENST00000216456 KIAA0355O15063 1070 aa26■■□□□ 1.75
VTI1B-201ENST00000216456 GPR153Q6NV75 609 aa26■■□□□ 1.75
VTI1B-201ENST00000216456 ANKRD33Q7Z3H0 272 aa26■■□□□ 1.75
VTI1B-201ENST00000216456 LAMA4Q16363 1823 aa26■■□□□ 1.75
VTI1B-201ENST00000216456 PCP11498 1178 aaKnown RBP25.99■■□□□ 1.75
VTI1B-201ENST00000216456 RAG1P15918 1043 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 CALML3P27482 149 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 TTC22Q5TAA0 569 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 CXCL17Q6UXB2 119 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 TLK2Q86UE8 772 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 GLT1D1Q96MS3 346 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 DSCC1Q9BVC3 393 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 SPC25Q9HBM1 224 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 ZSWIM5Q9P217 1185 aa25.99■■□□□ 1.75
VTI1B-201ENST00000216456 DYNC1LI2O43237 492 aaPredicted RBP25.98■■□□□ 1.75
VTI1B-201ENST00000216456 CDK7P50613 346 aa25.98■■□□□ 1.75
VTI1B-201ENST00000216456 ALDH5A1P51649 535 aaPredicted RBP25.98■■□□□ 1.75
VTI1B-201ENST00000216456 USH1GQ495M9 461 aa25.98■■□□□ 1.75
VTI1B-201ENST00000216456 ENAHQ8N8S7 591 aaPredicted RBP25.98■■□□□ 1.75
VTI1B-201ENST00000216456 PCSK9Q8NBP7 692 aaKnown RBP25.98■■□□□ 1.75
VTI1B-201ENST00000216456 PNMA1Q8ND90 353 aa25.98■■□□□ 1.75
VTI1B-201ENST00000216456 HIP1O00291 1037 aa25.97■■□□□ 1.75
VTI1B-201ENST00000216456 DGKHQ86XP1 1220 aa25.97■■□□□ 1.75
VTI1B-201ENST00000216456 TOX2Q96NM4 488 aa25.97■■□□□ 1.75
VTI1B-201ENST00000216456 ZSCAN10Q96SZ4 725 aaPredicted RBP25.97■■□□□ 1.75
VTI1B-201ENST00000216456 TBX21Q9UL17 535 aa25.97■■□□□ 1.75
VTI1B-201ENST00000216456 ELP1O95163 1332 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 DCDC2CA8MYV0 355 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 KIAA1211Q6ZU35 1233 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 MORC4Q8TE76 937 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 TBC1D5Q92609 795 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 TAF6LQ9Y6J9 622 aa25.96■■□□□ 1.75
VTI1B-201ENST00000216456 GRIN2DO15399 1336 aa25.95■■□□□ 1.75
VTI1B-201ENST00000216456 TNKSO95271 1327 aa25.95■■□□□ 1.75
VTI1B-201ENST00000216456 ARVCFO00192 962 aa25.95■■□□□ 1.74
VTI1B-201ENST00000216456 RPS6P62753 249 aaKnown RBP25.95■■□□□ 1.74
VTI1B-201ENST00000216456 NKX3-2P78367 333 aa25.95■■□□□ 1.74
VTI1B-201ENST00000216456 FSCN1Q16658 493 aaKnown RBP25.95■■□□□ 1.74
VTI1B-201ENST00000216456 IMMTQ16891 758 aaKnown RBP25.95■■□□□ 1.74
VTI1B-201ENST00000216456 RNF207Q6ZRF8 634 aa25.95■■□□□ 1.74
VTI1B-201ENST00000216456 GUCD1Q96NT3 240 aa25.95■■□□□ 1.74
VTI1B-201ENST00000216456 A0A0U1RQG5 324 aaPredicted RBP25.94■■□□□ 1.74
VTI1B-201ENST00000216456 PSMC6P62333 389 aa25.94■■□□□ 1.74
VTI1B-201ENST00000216456 PTH1RQ03431 593 aa25.94■■□□□ 1.74
VTI1B-201ENST00000216456 CYB5R4Q7L1T6 521 aa25.94■■□□□ 1.74
VTI1B-201ENST00000216456 IQCA1Q86XH1 822 aa25.94■■□□□ 1.74
VTI1B-201ENST00000216456 FAM126BQ8IXS8 530 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms