RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 NR1I2O75469 434 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 HSPA1AP0DMV8 641 aaKnown RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 HSPA1BP0DMV9 641 aaKnown RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 NTRK3Q16288 839 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 Q3C1V9 767 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 SLFN13Q68D06 897 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 PNMA1Q8ND90 353 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 MYCBPQ99417 103 aaPredicted RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 TANGO6Q9C0B7 1094 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 UBA5Q9GZZ9 404 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 DACT1Q9NYF0 836 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 CALCOCO1Q9P1Z2 691 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 FEZ2Q9UHY8 353 aaPredicted RBP12.94□□□□□ -0.34
CDKL1-201ENST00000216378 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 PDHBP11177 359 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
CDKL1-201ENST00000216378 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 PCP11498 1178 aaKnown RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 SATB1Q01826 763 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 TAF1CQ15572 869 aaPredicted RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 IFIT1BQ5T764 474 aaKnown RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 CATSPERGQ6ZRH7 1159 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ZNF654Q8IZM8 581 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 GOLPH3LQ9H4A5 285 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 TMOD4Q9NZQ9 345 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 CASP8AP2Q9UKL3 1982 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ERICH2A1L162 156 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 C19orf81C9J6K1 198 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 CNMDO75829 334 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 TOP1P11387 765 aaKnown RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ATP2B1P20020 1258 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 TROAPQ12815 778 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 RTN1Q16799 776 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 KRT40Q6A162 431 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 PROCA1Q8NCQ7 364 aaPredicted RBP12.93□□□□□ -0.34
CDKL1-201ENST00000216378 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 PRIMPOLQ96LW4 560 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 NCAPGQ9BPX3 1015 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 RBPJLQ9UBG7 517 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
CDKL1-201ENST00000216378 FLOT1O75955 427 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
CDKL1-201ENST00000216378 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 CCDC183Q5T5S1 534 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 PDLIM2Q96JY6 352 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 GINM1Q9NU53 330 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 DOCK3Q8IZD9 2030 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 DHX16O60231 1041 aaKnown RBP12.92□□□□□ -0.34
CDKL1-201ENST00000216378 SLC1A4P43007 532 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 NOP2P46087 812 aaKnown RBP12.92□□□□□ -0.34
CDKL1-201ENST00000216378 ME1P48163 572 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 HERVK_113P62684 666 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 SYNE3Q6ZMZ3 975 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
CDKL1-201ENST00000216378 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 KIFC2Q96AC6 838 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 PAGR1Q9BTK6 254 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
CDKL1-201ENST00000216378 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
CDKL1-201ENST00000216378 LIFRP42702 1097 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 LBX1P52954 281 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
CDKL1-201ENST00000216378 SART3Q15020 963 aaKnown RBP12.91□□□□□ -0.34
CDKL1-201ENST00000216378 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
CDKL1-201ENST00000216378 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 OXER1Q8TDS5 423 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 PORCNQ9H237 461 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 KAT14Q9H8E8 782 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 MAD2L2Q9UI95 211 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 RIPK3Q9Y572 518 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 WDR19Q8NEZ3 1342 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
CDKL1-201ENST00000216378 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 CA12O43570 354 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 CYTH3O43739 400 aa12.9□□□□□ -0.34
CDKL1-201ENST00000216378 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms