RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TICAM2Q86XR7 235 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 TCP11L1Q9NUJ3 509 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 STXBP5LQ9Y2K9 1186 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 ASTN1O14525 1302 aa17.69■□□□□ 0.42
UPK3A-201ENST00000216211 FRMPD2Q68DX3 1309 aaPredicted RBP17.69■□□□□ 0.42
UPK3A-201ENST00000216211 ASB14A6NK59 587 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 DCDC2CA8MYV0 355 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
UPK3A-201ENST00000216211 SDSP20132 328 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
UPK3A-201ENST00000216211 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 PLEKHM2Q8IWE5 1019 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 PCSK9Q8NBP7 692 aaKnown RBP17.68■□□□□ 0.42
UPK3A-201ENST00000216211 VTI1AQ96AJ9 217 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 GLT1D1Q96MS3 346 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 TOX2Q96NM4 488 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 RANBP17Q9H2T7 1088 aaKnown RBP17.68■□□□□ 0.42
UPK3A-201ENST00000216211 GPCPD1Q9NPB8 672 aa17.68■□□□□ 0.42
UPK3A-201ENST00000216211 CTAGE5O15320 804 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 ICAM1P05362 532 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 EPHB4P54760 987 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 BEX3Q00994 111 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 TNFAIP2Q03169 654 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 AKNAD1Q5T1N1 836 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 SYDE2Q5VT97 1194 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 BTNL9Q6UXG8 535 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
UPK3A-201ENST00000216211 TBC1D10CQ8IV04 446 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 EXOC6Q8TAG9 804 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 GUCD1Q96NT3 240 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 PURBQ96QR8 312 aaKnown RBP17.67■□□□□ 0.42
UPK3A-201ENST00000216211 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 ELP1O95163 1332 aa17.67■□□□□ 0.42
UPK3A-201ENST00000216211 MYH6P13533 1939 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 PTGS1P23219 599 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 CDK7P50613 346 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 NUCB1Q02818 461 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 FPGSQ05932 587 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 ZNF697Q5TEC3 545 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 PDGFCQ9NRA1 345 aa17.66■□□□□ 0.42
UPK3A-201ENST00000216211 A0A0U1RQG5 324 aaPredicted RBP17.65■□□□□ 0.42
UPK3A-201ENST00000216211 PDHBP11177 359 aa17.65■□□□□ 0.42
UPK3A-201ENST00000216211 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
UPK3A-201ENST00000216211 TLK2Q86UE8 772 aa17.65■□□□□ 0.42
UPK3A-201ENST00000216211 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
UPK3A-201ENST00000216211 OSBPL3Q9H4L5 887 aa17.65■□□□□ 0.42
UPK3A-201ENST00000216211 GNEQ9Y223 722 aaKnown RBP17.65■□□□□ 0.42
UPK3A-201ENST00000216211 NEDD4P46934 1319 aa17.65■□□□□ 0.42
UPK3A-201ENST00000216211 MROH7Q68CQ1 1323 aa17.65■□□□□ 0.42
UPK3A-201ENST00000216211 ARVCFO00192 962 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 TIMP1P01033 207 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 SMPD1P17405 629 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 NKX3-2P78367 333 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 BAATQ14032 418 aaPredicted RBP17.64■□□□□ 0.41
UPK3A-201ENST00000216211 TAPT1Q6NXT6 567 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
UPK3A-201ENST00000216211 RNPC3Q96LT9 517 aaKnown RBP17.64■□□□□ 0.41
UPK3A-201ENST00000216211 TTC14Q96N46 770 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
UPK3A-201ENST00000216211 UNC80Q8N2C7 3258 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 NFIBO00712 420 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 ZNF213O14771 459 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 DYNC1LI2O43237 492 aaPredicted RBP17.63■□□□□ 0.41
UPK3A-201ENST00000216211 PCP11498 1178 aaKnown RBP17.63■□□□□ 0.41
UPK3A-201ENST00000216211 SMAD3P84022 425 aaKnown RBP17.63■□□□□ 0.41
UPK3A-201ENST00000216211 TMEM63BQ5T3F8 832 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 RNF41Q9H4P4 317 aaPredicted RBP17.63■□□□□ 0.41
UPK3A-201ENST00000216211 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 CDH23Q9H251 3354 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 EYSQ5T1H1 3165 aa17.63■□□□□ 0.41
UPK3A-201ENST00000216211 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 ALDH5A1P51649 535 aaPredicted RBP17.62■□□□□ 0.41
UPK3A-201ENST00000216211 ZNF543Q08ER8 600 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 IQSEC1Q6DN90 963 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 CXCL17Q6UXB2 119 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 SLC30A10Q6XR72 485 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 FAM126BQ8IXS8 530 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 MORC4Q8TE76 937 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 ESR2Q92731 530 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 AP5M1Q9H0R1 490 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 SEMA6BQ9H3T3 888 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 VTA1Q9NP79 307 aa17.62■□□□□ 0.41
UPK3A-201ENST00000216211 A0A0C4DFX4 3053 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 DLL1O00548 723 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 TLR3O15455 904 aaKnown RBP17.61■□□□□ 0.41
UPK3A-201ENST00000216211 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 SNHG28P0DPA3 235 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 CALML3P27482 149 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
UPK3A-201ENST00000216211 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 KIAA1211Q6ZU35 1233 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 CLEC4DQ8WXI8 215 aa17.61■□□□□ 0.41
UPK3A-201ENST00000216211 PPP1R12CQ9BZL4 782 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms