RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.3■■□□□ 1.32
SYNGR1-201ENST00000216155 MTMR7Q9Y216 660 aa23.3■■□□□ 1.32
SYNGR1-201ENST00000216155 GNEQ9Y223 722 aaKnown RBP23.3■■□□□ 1.32
SYNGR1-201ENST00000216155 ASB14A6NK59 587 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 RANBP6O60518 1105 aaKnown RBP23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 FOSL2P15408 326 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 PTGS1P23219 599 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 DNAJB2P25686 324 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 EVI5LQ96CN4 794 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 CYP39A1Q9NYL5 469 aa23.29■■□□□ 1.32
SYNGR1-201ENST00000216155 ORC4O43929 436 aa23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 FGRP09769 529 aa23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 PPIGQ13427 754 aaKnown RBP eCLIP23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 ANKRD45Q5TZF3 282 aa23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 FBXO16Q8IX29 292 aaPredicted RBP23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
SYNGR1-201ENST00000216155 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 CD4P01730 458 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 CSF2RAP15509 400 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 CCDC96Q2M329 555 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 TMEM240Q5SV17 173 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 CXCL17Q6UXB2 119 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 C16orf59Q7L2K0 433 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 DCAF4Q8WV16 495 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 PPP1R12CQ9BZL4 782 aa23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 RANBP17Q9H2T7 1088 aaKnown RBP23.27■■□□□ 1.32
SYNGR1-201ENST00000216155 TLR3O15455 904 aaKnown RBP23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 ICAM1P05362 532 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 SMPD1P17405 629 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 PDE1AP54750 535 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 ALX1Q15699 326 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 FSCN1Q16658 493 aaKnown RBP23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 SLC43A3Q8NBI5 491 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 FAM227BQ96M60 508 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 PURBQ96QR8 312 aaKnown RBP23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 PDGFCQ9NRA1 345 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 HELLSQ9NRZ9 838 aa23.26■■□□□ 1.31
SYNGR1-201ENST00000216155 A0A0D9SFI3 127 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 GRIN2CQ14957 1233 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 TMEM63BQ5T3F8 832 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 RASIP1Q5U651 963 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 TTBK2Q6IQ55 1244 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 TAPT1Q6NXT6 567 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 NSMFQ6X4W1 530 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 EEPD1Q7L9B9 569 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 TMEM199Q8N511 208 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 CRBNQ96SW2 442 aa23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 ZBTB47Q9UFB7 747 aaPredicted RBP23.25■■□□□ 1.31
SYNGR1-201ENST00000216155 SLC16A2P36021 539 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 BTNL9Q6UXG8 535 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 MORC4Q8TE76 937 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 TIFAQ96CG3 184 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 GRIN2DO15399 1336 aa23.24■■□□□ 1.31
SYNGR1-201ENST00000216155 DYNC1LI2O43237 492 aaPredicted RBP23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 CABYRO75952 493 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 FGAP02671 866 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 ACRP10323 421 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 CYP2C18P33260 490 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 RRP12Q5JTH9 1297 aaKnown RBP23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 SYDE2Q5VT97 1194 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 PSRC1Q6PGN9 363 aaPredicted RBP23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 TMEM47Q9BQJ4 181 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 AP5M1Q9H0R1 490 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 ZNF576Q9H609 170 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 VTA1Q9NP79 307 aa23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 FRMPD2Q68DX3 1309 aaPredicted RBP23.23■■□□□ 1.31
SYNGR1-201ENST00000216155 GRXCR1A8MXD5 290 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 NFIBO00712 420 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 TOP1P11387 765 aaKnown RBP23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 PBX2P40425 430 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 HDAC1Q13547 482 aaPredicted RBP23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 ITGA7Q13683 1181 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 MCMDC2Q4G0Z9 681 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 IQSEC1Q6DN90 963 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 ZNF365Q70YC5 407 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 PBX4Q9BYU1 374 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 ZMYM6O95789 1325 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 UMODL1Q5DID0 1318 aa23.22■■□□□ 1.31
SYNGR1-201ENST00000216155 HSPD1P10809 573 aaKnown RBP23.21■■□□□ 1.31
SYNGR1-201ENST00000216155 BAATQ14032 418 aaPredicted RBP23.21■■□□□ 1.31
SYNGR1-201ENST00000216155 HIPK3Q9H422 1215 aa23.21■■□□□ 1.31
SYNGR1-201ENST00000216155 TCP11L1Q9NUJ3 509 aa23.21■■□□□ 1.31
SYNGR1-201ENST00000216155 Q9Y3F1 56 aa23.21■■□□□ 1.31
SYNGR1-201ENST00000216155 ZEB2O60315 1214 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 PDHBP11177 359 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 ALDH5A1P51649 535 aaPredicted RBP23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 HAND2P61296 217 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 PSMC6P62333 389 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 SLC30A10Q6XR72 485 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 KIAA1211Q6ZU35 1233 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 GPCPD1Q9NPB8 672 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 IL23AQ9NPF7 189 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 MUC3AQ02505 3323 aa23.2■■□□□ 1.3
SYNGR1-201ENST00000216155 B4GALT4O60513 344 aa23.19■■□□□ 1.3
SYNGR1-201ENST00000216155 NMIQ13287 307 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms