RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 WASF1Q92558 559 aa23.31■■□□□ 1.32
RHBDD3-201ENST00000216085 EFCC1Q9HA90 598 aa23.31■■□□□ 1.32
RHBDD3-201ENST00000216085 STK36Q9NRP7 1315 aa23.31■■□□□ 1.32
RHBDD3-201ENST00000216085 STRNO43815 780 aa23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 GNRH1P01148 92 aa23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 HSPA8P11142 646 aaKnown RBP23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 PSMC4P43686 418 aa23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 KCTD2Q14681 263 aa23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 PLEKHH3Q7Z736 793 aa23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 CCDC12Q8WUD4 166 aaPredicted RBP23.3■■□□□ 1.32
RHBDD3-201ENST00000216085 hCG_1642624A0A1W2PR95 340 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 FCER1AP12319 257 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 SCG2P13521 617 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 HOXD10P28358 340 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 PFKFB3Q16875 520 aaPredicted RBP23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 GPR142Q7Z601 462 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 MCF2L2Q86YR7 1114 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 RIPK3Q9Y572 518 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 HMGN5P82970 282 aaKnown RBP23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 CD99L2Q8TCZ2 262 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 SOCS4Q8WXH5 440 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 MAF1Q9H063 256 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 KIF3AQ9Y496 699 aa23.29■■□□□ 1.32
RHBDD3-201ENST00000216085 PTPDC1A2A3K4 754 aa23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 XBP1P17861 261 aa23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 ABRAQ8N0Z2 381 aa23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 ANKRD35Q8N283 1001 aa23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 NSUN7Q8NE18 718 aaKnown RBP23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 MMP19Q99542 508 aa23.28■■□□□ 1.32
RHBDD3-201ENST00000216085 PPP1R11O60927 126 aaPredicted RBP23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 NAPAP54920 295 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 CCDC148Q8NFR7 591 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 ORC3Q9UBD5 711 aaPredicted RBP23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 PFASO15067 1338 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 ECM2O94769 699 aaPredicted RBP23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 LBX1P52954 281 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 BARHL2Q9NY43 387 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 SLC5A4Q9NY91 659 aa23.27■■□□□ 1.32
RHBDD3-201ENST00000216085 CTDNEP1O95476 244 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 PTPREP23469 700 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 BECN1Q14457 450 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 WWC2Q6AWC2 1192 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 GPKOWQ92917 476 aaPredicted RBP eCLIP23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 DDX11Q96FC9 970 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 TRIM47Q96LD4 638 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 NUDT12Q9BQG2 462 aa23.26■■□□□ 1.31
RHBDD3-201ENST00000216085 SLC15A5A6NIM6 579 aa23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 ST3GAL1Q11201 340 aa23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 NSMFQ6X4W1 530 aa23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 FAM177A1Q8N128 213 aaPredicted RBP23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 FAM184AQ8NB25 1140 aa23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 GLT8D2Q9H1C3 349 aa23.25■■□□□ 1.31
RHBDD3-201ENST00000216085 HSP90AA1P07900 732 aaKnown RBP23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 MUM1L1Q5H9M0 696 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 TEX2Q8IWB9 1127 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 SAMD3Q8N6K7 520 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 RGS22Q8NE09 1264 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 CUL5Q93034 780 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 ARHGAP39Q9C0H5 1083 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 SH3GLB2Q9NR46 395 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 MAP3K20Q9NYL2 800 aaKnown RBP23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 MGAMO43451 1857 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 NFIBO00712 420 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 TAL1P17542 331 aaPredicted RBP23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 PRMT2P55345 433 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 GRB14Q14449 540 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 PKN1Q16512 942 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 RNF207Q6ZRF8 634 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 CLEC4DQ8WXI8 215 aa23.24■■□□□ 1.31
RHBDD3-201ENST00000216085 STXBP3O00186 592 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 JAK2O60674 1132 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 ADORA2AP29274 412 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 DPP9Q86TI2 863 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 A1CFQ9NQ94 594 aaKnown RBP23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 SMC3Q9UQE7 1217 aa23.23■■□□□ 1.31
RHBDD3-201ENST00000216085 PLXNB2O15031 1838 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 RGS2P41220 211 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 CUL4AQ13619 759 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 TRIM29Q14134 588 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 ALG1Q9BT22 464 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 TRIM17Q9Y577 477 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 GCOM1H8Y6P7 765 aaPredicted RBP23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 CFBP00751 764 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 POLR2MP0CAP2 368 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 CTGFP29279 349 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 GNA11P29992 359 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 MRPL12P52815 198 aaKnown RBP23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 PSTPIP2Q9H939 334 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 C6orf50Q9HD87 102 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 SRRDQ9UH36 339 aa23.22■■□□□ 1.31
RHBDD3-201ENST00000216085 ZNF236Q9UL36 1845 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 RBBP6Q7Z6E9 1792 aaKnown RBP23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 ANP32AP39687 249 aaKnown RBP23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 ADCY7P51828 1080 aa23.21■■□□□ 1.31
RHBDD3-201ENST00000216085 MAP2K5Q13163 448 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms