RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 NLRP10Q86W26 655 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 ARL8AQ96BM9 186 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 PYM1Q9BRP8 204 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 WDR19Q8NEZ3 1342 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 MYO1FO00160 1098 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 PDE2AO00408 941 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 CCNT1O60563 726 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 HEXIM1O94992 359 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 NAPAP54920 295 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 HERVK_113P62684 666 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 APBA1Q02410 837 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 CCNI2Q6ZMN8 369 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 KANSL2Q9H9L4 492 aa12.43□□□□□ -0.42
ACTN1-201ENST00000193403 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
ACTN1-201ENST00000193403 LRRC41Q15345 812 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 TCERG1LQ5VWI1 586 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 LIMA1Q9UHB6 759 aaKnown RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 HYOU1Q9Y4L1 999 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 HSPA1LP34931 641 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 TECP42680 631 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 EHHADHQ08426 723 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 B4GALNT4Q76KP1 1039 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 BICDL2A1A5D9 508 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 ACTN3Q08043 901 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 E2F5Q15329 346 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 CABP7Q86V35 215 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 ZSCAN29Q8IWY8 852 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 NELFCDQ8IXH7 590 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
ACTN1-201ENST00000193403 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-201ENST00000193403 GOLGA8KD6RF30 607 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 FCER1AP12319 257 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 KIF11P52732 1056 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 SEC24CP53992 1094 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 NOX5Q96PH1 765 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 TSGA10Q9BZW7 698 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 CALML3P27482 149 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 NF2P35240 595 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
ACTN1-201ENST00000193403 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 USP21Q9UK80 565 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 REXO2Q9Y3B8 237 aaKnown RBP12.41□□□□□ -0.42
ACTN1-201ENST00000193403 FMN2Q9NZ56 1722 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 ZSCAN5CA6NGD5 496 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-201ENST00000193403 TRAF5O00463 557 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 SEMA3EO15041 775 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 CYP2D6P10635 497 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-201ENST00000193403 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 FBXL16Q8N461 479 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 PCDHA13Q9Y5I0 950 aa12.41□□□□□ -0.42
ACTN1-201ENST00000193403 CEP104O60308 925 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 CALM1P0DP23 149 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 CALM2P0DP24 149 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 CALM3P0DP25 149 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 RBM5P52756 815 aaKnown RBP eCLIP12.4□□□□□ -0.42
ACTN1-201ENST00000193403 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 CPLX4Q7Z7G2 160 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 TSG101Q99816 390 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 STIM2Q9P246 746 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 FAM237AA0A1B0GTK4 181 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-201ENST00000193403 EPHB4P54760 987 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 ZBED6P86452 979 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-201ENST00000193403 CFAP221Q4G0U5 840 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
ACTN1-201ENST00000193403 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
ACTN1-201ENST00000193403 PSMD14O00487 310 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 KCNQ2O43526 872 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 PLCG1P19174 1290 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 EEF1GP26641 437 aaKnown RBP12.4□□□□□ -0.43
ACTN1-201ENST00000193403 PAK2Q13177 524 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.43
ACTN1-201ENST00000193403 P2RX5Q93086 422 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms