RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 ENO4A6NNW6 628 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 SLC5A1P13866 664 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 TRIM29Q14134 588 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 ANKRD20A8PQ5CZ79 823 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 EMC10Q5UCC4 262 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 OR8K1Q8NGG5 319 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 CTAGE1Q96RT6 745 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 SLC39A2Q9NP94 309 aa16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 EPN1Q9Y6I3 576 aaPredicted RBP16.51■□□□□ 0.23
TMEM38A-201ENST00000187762 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 MGRN1O60291 552 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 NDUFA10O95299 355 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 KRT14P02533 472 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 PECAM1P16284 738 aaPredicted RBP16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 NR1D1P20393 614 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 CDC25AP30304 524 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 MAP3K12Q12852 859 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 SPATA1Q5VX52 437 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 EMBQ6PCB8 327 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 RUBCNQ92622 972 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 CYFIP2Q96F07 1278 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 HOMER3Q9NSC5 361 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 KCNJ14Q9UNX9 436 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 DISP2A7MBM2 1401 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 E7EVH7 732 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 IL6STP40189 918 aaPredicted RBP16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 MDH1P40925 334 aaKnown RBP16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 BCAMP50895 628 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 RPS6KA3P51812 740 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 MMGT1Q8N4V1 131 aa16.5■□□□□ 0.23
TMEM38A-201ENST00000187762 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SSRP1Q08945 709 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 XRCC4Q13426 336 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 ALX1Q15699 326 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 GRAMD1CQ8IYS0 662 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 NSMCE1Q8WV22 266 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CHP1Q99653 195 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 LRRC1Q9BTT6 524 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 NHSL1Q5SYE7 1610 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CAND2O75155 1236 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 IPO7O95373 1038 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 STX17P56962 302 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 GRIN1Q05586 938 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CCDC122Q5T0U0 273 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CAPRIN2Q6IMN6 1127 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 CAVIN3Q969G5 261 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 NUCKS1Q9H1E3 243 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 TFR2Q9UP52 801 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 LIFRP42702 1097 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SCTRP47872 440 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 TBC1D31Q96DN5 1066 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
TMEM38A-201ENST00000187762 SYNRGQ9UMZ2 1314 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 ATP6V1G2O95670 118 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 PDE6BP35913 854 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 SNX1Q13596 522 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 KLHL10Q6JEL2 608 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 STAMBPL1Q96FJ0 436 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 EBF2Q9HAK2 575 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 NOD2Q9HC29 1040 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 KRT9P35527 623 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 TOB1P50616 345 aaPredicted RBP16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 RAB27AP51159 221 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 HERVK_113P62684 666 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
TMEM38A-201ENST00000187762 COL4A1P02462 1669 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 ZNF233A6NK53 670 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 MRPS25P82663 173 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 NOSTRINQ8IVI9 506 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 DIS3L2Q8IYB7 885 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 SEMA3EO15041 775 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 SLC7A5Q01650 507 aa16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 KRI1Q8N9T8 703 aaKnown RBP16.47■□□□□ 0.23
TMEM38A-201ENST00000187762 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms