RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
LAPTM4A-201ENST00000175091 PDILTQ8N807 584 aa17.73■□□□□ 0.43
LAPTM4A-201ENST00000175091 SMCHD1A6NHR9 2005 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 POLR2AP24928 1970 aaKnown RBP17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 EDIL3O43854 480 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 EPS15P42566 896 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 IQCB1Q15051 598 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 POSTNQ15063 836 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 DPCR1Q3MIW9 517 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 DCAF15Q66K64 600 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 DTHD1Q6ZMT9 781 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 CEP57L1Q8IYX8 460 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 PPP2R3BQ9Y5P8 575 aa17.72■□□□□ 0.43
LAPTM4A-201ENST00000175091 FOXN1O15353 648 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 HIRAP54198 1017 aaPredicted RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 NLRP12P59046 1061 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZYXQ15942 572 aaKnown RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 E2F4Q16254 413 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 KANK3Q6NY19 840 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 HOOK2Q96ED9 719 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 RBBP6Q7Z6E9 1792 aaKnown RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 SNAP25P60880 206 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZRSR1Q15695 479 aaKnown RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 DHX58Q96C10 678 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 FEZ1Q99689 392 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 RANBP17Q9H2T7 1088 aaKnown RBP17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 ZNF112Q9UJU3 913 aa17.71■□□□□ 0.43
LAPTM4A-201ENST00000175091 PITPNM2Q9BZ72 1349 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 OTOFQ9HC10 1997 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 MEIS2O14770 477 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 SLFN14P0C7P3 912 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 PRR29P0C7W0 189 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 INPP5BP32019 993 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 AP3B2Q13367 1082 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 USH1GQ495M9 461 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 NT5DC1Q5TFE4 455 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 SH3RF1Q7Z6J0 888 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 BPIFA3Q9BQP9 254 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 KIAA1683Q9H0B3 1180 aa17.7■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 BIN1O00499 593 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 OPLAHO14841 1288 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 TDP2O95551 362 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 TXLNAP40222 546 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 LPAR1Q92633 364 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 NAT10Q9H0A0 1025 aaKnown RBP17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 PCDHA5Q9Y5H7 936 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 WDR90Q96KV7 1748 aa17.69■□□□□ 0.42
LAPTM4A-201ENST00000175091 WDR46O15213 610 aaKnown RBP17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 AP5Z1O43299 807 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 SLC37A4O43826 429 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 TRAF1Q13077 416 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 TEX2Q8IWB9 1127 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 DHX40Q8IX18 779 aaKnown RBP17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 AK8Q96MA6 479 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 MTMR9Q96QG7 549 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 ANO3Q9BYT9 981 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 FEM1BQ9UK73 627 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 SARSP49591 514 aaKnown RBP17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 PDXDC2PQ6P474 469 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 GRAMD1CQ8IYS0 662 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 IQUBQ8NA54 791 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 CCSER1Q9C0I3 900 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 DISC1Q9NRI5 854 aa17.68■□□□□ 0.42
LAPTM4A-201ENST00000175091 ADCY5O95622 1261 aa17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 KIFC2Q96AC6 838 aa17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 WRNIP1Q96S55 665 aa17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
LAPTM4A-201ENST00000175091 PP2D1A8MPX8 630 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
LAPTM4A-201ENST00000175091 LMOD1P29536 600 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms