RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RHOXF2BP0C7M4 288 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 PLCG1P19174 1290 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 ZNF658Q5TYW1 1059 aaPredicted RBP14.76□□□□□ -0.05
CTNS-201ENST00000046640 ACRBPQ8NEB7 543 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 RHOXF2Q9BQY4 288 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.76□□□□□ -0.05
CTNS-201ENST00000046640 DLEC1Q9Y238 1755 aa14.76□□□□□ -0.05
CTNS-201ENST00000046640 KCNJ18B7U540 433 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 CCDC175P0C221 793 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 TCP10Q12799 353 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 KCNJ12Q14500 433 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 NONOQ15233 471 aaKnown RBP eCLIP14.75□□□□□ -0.05
CTNS-201ENST00000046640 SHROOM1Q2M3G4 852 aaPredicted RBP14.75□□□□□ -0.05
CTNS-201ENST00000046640 TTBK2Q6IQ55 1244 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CTNS-201ENST00000046640 TAF1LQ8IZX4 1826 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 NHSQ6T4R5 1651 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 GYPCP04921 128 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 PLCG2P16885 1265 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 ERCC3P19447 782 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 KIF4BQ2VIQ3 1234 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 CCDC178Q5BJE1 867 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
CTNS-201ENST00000046640 ZMYND12Q9H0C1 365 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 DBNDD1Q9H9R9 158 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 C6orf50Q9HD87 102 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 PDHBP11177 359 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 C15orf52Q6ZUT6 534 aaKnown RBP14.75□□□□□ -0.05
CTNS-201ENST00000046640 CABP7Q86V35 215 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 GPR161Q8N6U8 529 aaKnown RBP14.75□□□□□ -0.05
CTNS-201ENST00000046640 GOLGA1Q92805 767 aa14.75□□□□□ -0.05
CTNS-201ENST00000046640 UBXN1Q04323 297 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 NFIAQ12857 509 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 TCP11X2Q5H9J9 407 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 FCHSD1Q86WN1 690 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 ZFPM1Q8IX07 1006 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 RWDD2AQ9UIY3 292 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 OR52Z1P0C646 297 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 COPB1P53618 953 aaKnown RBP14.74□□□□□ -0.05
CTNS-201ENST00000046640 UBE2SQ16763 222 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 KCTD1Q719H9 257 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 GPIHBP1Q8IV16 184 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 ZNF622Q969S3 477 aaKnown RBP eCLIP14.74□□□□□ -0.05
CTNS-201ENST00000046640 SPZ1Q9BXG8 430 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 MTMR4Q9NYA4 1195 aa14.74□□□□□ -0.05
CTNS-201ENST00000046640 TPM1P09493 284 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 FCER1AP12319 257 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 CHMP4BP1P59074 171 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 IRX5P78411 483 aaPredicted RBP14.73□□□□□ -0.05
CTNS-201ENST00000046640 NEK8Q86SG6 692 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 SLF2Q8IX21 1173 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 REXO1Q8N1G1 1221 aaKnown RBP14.73□□□□□ -0.05
CTNS-201ENST00000046640 TBC1D22AQ8WUA7 517 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 CTAGE1Q96RT6 745 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 TDP2O95551 362 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 GNA11P29992 359 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 TNNI2P48788 182 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 LMAN1P49257 510 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 RBM5P52756 815 aaKnown RBP eCLIP14.73□□□□□ -0.05
CTNS-201ENST00000046640 ASIC1P78348 528 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 LONRF2Q1L5Z9 754 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 KRT27Q7Z3Y8 459 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 KIAA0825Q8IV33 1275 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 RMND1Q9NWS8 449 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 CALCOCO1Q9P1Z2 691 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 ADGRG1Q9Y653 693 aa14.73□□□□□ -0.05
CTNS-201ENST00000046640 GOLGA6L9A6NEM1 432 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 KIF5CO60282 957 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 MFAP3LO75121 409 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 HOXA10P31260 410 aaPredicted RBP14.72□□□□□ -0.05
CTNS-201ENST00000046640 PBX1P40424 430 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 CCDC96Q2M329 555 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 TMED8Q6PL24 325 aaPredicted RBP14.72□□□□□ -0.05
CTNS-201ENST00000046640 RSRC2Q7L4I2 434 aaKnown RBP14.72□□□□□ -0.05
CTNS-201ENST00000046640 IRF2BP1Q8IU81 584 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 THSD7AQ9UPZ6 1657 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 UTRNP46939 3433 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 NKRFO15226 690 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTNS-201ENST00000046640 SLC37A4O43826 429 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 KLRC4O43908 158 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 PHACTR2O75167 634 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 PDE4DQ08499 809 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 DYMQ7RTS9 669 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 KRT25Q7Z3Z0 450 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 SLC35F6Q8N357 371 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 DAGLBQ8NCG7 672 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 FUT8Q9BYC5 575 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 GAKO14976 1311 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 MAST2Q6P0Q8 1798 aa14.72□□□□□ -0.05
CTNS-201ENST00000046640 POTEMA6NI47 508 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 H3BQF6 201 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 ONECUT3O60422 494 aaPredicted RBP14.71□□□□□ -0.05
CTNS-201ENST00000046640 STK4Q13043 487 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 SP8Q8IXZ3 490 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms