RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 BACH1O14867 736 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 GTPBP6O43824 516 aaPredicted RBP15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 MAGEA1P43355 309 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 TMC4Q7Z404 712 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 DNAAF5Q86Y56 855 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 ARPP21Q9UBL0 812 aaPredicted RBP15.12■□□□□ 0.01
SEMA3F-201ENST00000002829 SLC1A4P43007 532 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 CASP8Q14790 479 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 NOA1Q8NC60 698 aaKnown RBP15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 SALL1Q9NSC2 1324 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L15C9J2P7 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L13C9JLJ4 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L11C9JVI0 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L18D6R9N7 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L22D6RA61 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L17D6RBQ6 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L19D6RCP7 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L20D6RJB6 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 RNF40O75150 1001 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 HLA-DOAP06340 250 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 OR52Z1P0C646 297 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L24Q0WX57 530 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 GRIK5Q16478 980 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 NAA35Q5VZE5 725 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 USP17L6PQ6QN14 398 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 CCDC155Q8N6L0 562 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 GSDMAQ96QA5 445 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 ZNF185O15231 689 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 CFBP00751 764 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 C2orf54Q08AI8 447 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 PRR16Q569H4 304 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 CPXCR1Q8N123 301 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 BCAS4Q8TDM0 211 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 PNKPQ96T60 521 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 AGPAT5Q9NUQ2 364 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 TUBE1Q9UJT0 475 aa15.11■□□□□ 0.01
SEMA3F-201ENST00000002829 CDHR2Q9BYE9 1310 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 EBAG9O00559 213 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 TRIM37O94972 964 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 TDP2O95551 362 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 NTSR2O95665 410 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 RASSF7Q02833 373 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 TTBK2Q6IQ55 1244 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 SH2D3AQ9BRG2 576 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 IFIH1Q9BYX4 1025 aaKnown RBP15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 ADAMTS3O15072 1205 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 MFAP3LO75121 409 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 TACC1O75410 805 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 H2AFXP16104 143 aaPredicted RBP15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 SYCP3Q8IZU3 236 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 ADGRG1Q9Y653 693 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 PABPC4Q13310 644 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 CCDC174Q6PII3 467 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 NEK8Q86SG6 692 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 EHD4Q9H223 541 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
SEMA3F-201ENST00000002829 CDK8P49336 464 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 TROAPQ12815 778 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 NKX1-1Q15270 411 aaPredicted RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 SRGAP1Q7Z6B7 1085 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 SCLT1Q96NL6 688 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ABCC12Q96J65 1359 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 GOLGA6CA6NDK9 693 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 EIF3CLB5ME19 914 aaKnown RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 NDUFAB1O14561 156 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 GOLGA6DP0CG33 693 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ADCY7P51828 1080 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 POLR2FP61218 127 aaKnown RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 REXO1L1PQ8IX06 675 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 GBP3Q9H0R5 595 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 GOLGA6AQ9NYA3 693 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 SAR1BQ9Y6B6 198 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 NCK2O43639 380 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 MOCS3O95396 460 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 IVLP07476 585 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ERCC5P28715 1186 aaPredicted RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 HOXA13P31271 388 aaPredicted RBP15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 KRT83P78385 493 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 TCP11X2Q5H9J9 407 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 GIMAP7Q8NHV1 300 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 ALS2CR12Q96Q35 445 aa15.09■□□□□ 0.01
SEMA3F-201ENST00000002829 CDC23Q9UJX2 597 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms