RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 GneQ91WG8 722 aaKnown RBP9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Dis3Q9CSH3 958 aaKnown RBP9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Clstn1Q9EPL2 979 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 BC025446A0A087WQT1 134 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Slc23a4A0A0J9YUX7 615 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Pate3B3GLJ3 98 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ccdc146E9Q9F7 977 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gm15448F6PZL4 682 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Hmox1P14901 289 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 OatP29758 439 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ccl5P30882 91 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Defa-rs12P50716 91 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Map4k1P70218 827 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Pla2g6P97819 807 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Q3TYL0 343 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ccdc174Q3U155 467 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Phlda1Q62392 405 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Rhot2Q8JZN7 620 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Xpo5Q924C1 1204 aaKnown RBP9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Arhgef25Q9CWR0 618 aa9.52□□□□□ -0.88
Trim40-203ENSMUST00000172711 Fyb2A2A995 729 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Tmem240B2RWJ3 173 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Gm20425E9Q035 978 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Tlk2O55047 718 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Lnx1O70263 728 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cbfa2t2O70374 594 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Adamts10P58459 1104 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Psmc6P62334 389 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 NfibP97863 570 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Pou2f2Q00196 463 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Carmil2Q3V3V9 1296 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ece1Q4PZA2 769 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Tp53i13Q5F267 385 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Hand2Q61039 217 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Phf24Q80TL4 400 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Crb2Q80YA8 1282 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Alx1Q8C8B0 326 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Kcnv2Q8CFS6 562 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Etv3Q8R4Z4 513 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Nop2Q922K7 793 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Rbm10Q99KG3 930 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 CutaQ9CQ89 177 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cep72Q9D3R3 646 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Dusp6Q9DBB1 381 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Myh8P13542 1937 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ulk4Q3V129 1303 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Wdr81Q5ND34 1934 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Apba1B2RUJ5 842 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Metap2O08663 478 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Glud1P26443 558 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Neurl1bQ0MW30 546 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Gtf3c3Q3TMP1 882 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ffar3Q3UFD7 319 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Etaa1Q5SVT3 877 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Stxbp3Q60770 592 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ces3aQ63880 571 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Haus6Q6NV99 933 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Tcaf3Q6QR59 914 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Slc9a7Q8BLV3 726 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Calhm6Q8C9E8 313 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Riox2Q8CD15 465 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Agbl2Q8CDK2 862 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ccdc178Q8CDV0 866 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Nup88Q8CEC0 753 aaKnown RBP9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Ces3bQ8VCU1 571 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Pcdhac2Q91Y09 1006 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Znf287Q9EQB9 759 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Tmem47Q9JJG6 181 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cdc42ep5Q9Z0X0 150 aa9.51□□□□□ -0.89
Trim40-203ENSMUST00000172711 Myl3P09542 204 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Traf1P39428 409 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Rnf19aP50636 840 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Usp5P56399 858 aaKnown RBP9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Hspd1P63038 573 aaKnown RBP9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Fbln1Q08879 705 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Fam189a2Q4FZH1 290 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Fscn1Q61553 493 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Gga3Q8BMI3 718 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Armc6Q8BNU0 468 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 AidaQ8C4Q6 305 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Vps53Q8CCB4 832 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Stard7Q8R1R3 373 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Adam33Q923W9 797 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Cyp46a1Q9WVK8 500 aa9.5□□□□□ -0.89
Trim40-203ENSMUST00000172711 Adamts9E9PUN6 1931 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Slc6a21A0A1B0GSD2 748 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Supt5hO55201 1082 aaKnown RBP9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Lman2lP59481 347 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Znf865Q3U3I9 1058 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Xkr5Q5GH66 676 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Vmn1r209Q5NC97 312 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Samhd1Q60710 627 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Znf280dQ68FE8 974 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 AnlnQ8K298 1121 aaKnown RBP9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Vmn1r191Q8K4D0 298 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Arhgef6Q8K4I3 771 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 DutQ8VCG1 200 aaKnown RBP9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Oxnad1Q8VE38 311 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Fgd4Q91ZT5 766 aa9.49□□□□□ -0.89
Trim40-203ENSMUST00000172711 Capns2Q9D7J7 247 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms