RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 YwhahP68510 246 aaKnown RBP15.15■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Slc17a8Q8BFU8 601 aa15.15■□□□□ 0.02
Col5a1-201ENSMUST00000028280 E330017A01RikQ8BU47 192 aa15.15■□□□□ 0.02
Col5a1-201ENSMUST00000028280 Ccdc62E9PVD1 701 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nacc1Q7TSZ8 514 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rbm41Q8JZV4 413 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 HdlbpQ8VDJ3 1268 aaKnown RBP15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tmed2Q9R0Q3 201 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Pbrm1Q8BSQ9 1634 aaKnown RBP15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Sult6b1P0CC03 303 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Q3KNL4 93 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Mettl14Q3UIK4 456 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Caprin1Q60865 707 aaKnown RBP15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Agap2Q3UHD9 1186 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Spag7Q7TNE3 227 aaKnown RBP15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Klhl38Q8BSF5 581 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 E4f1Q8CCE9 783 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 NsfP46460 744 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ppp1r13bQ62415 1087 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Krt9Q6RHW0 743 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Mrps26Q80ZS3 200 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Irak4Q8R4K2 459 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Pcdha7Q91Y13 937 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Orc3Q9JK30 715 aaKnown RBP15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Mlh1Q9JK91 760 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Lrrc7Q80TE7 1490 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Lig1P37913 916 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Itga6Q61739 1091 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Grin1P35438 938 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 MpndQ3TV65 487 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rab3ipQ68EF0 428 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cabp7Q91ZM8 215 aa15.14■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Wdr17E9Q271 1322 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rab20P35295 233 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Atp8a1P70704 1164 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Parp3Q3ULW8 533 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nxf1Q99JX7 618 aaKnown RBP15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 MlxiplQ99MZ3 864 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Trim12cD3Z3L3 497 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 ScinQ60604 715 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Prdm1Q60636 856 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ttll7A4Q9F0 912 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cylc2B1AWN8 422 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Bin2D3Z6Q9 489 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Pdha1P35486 390 aaKnown RBP15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 CalcaP70160 136 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cct8l1Q80YT3 562 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tsta3P23591 321 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Bach1P97302 739 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 OcrlQ6NVF0 900 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Adi1Q99JT9 179 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Deaf1Q9Z1T5 566 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Raph1F2Z3U3 1266 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rab3gap1Q80UJ7 981 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Txndc9Q9CQ79 226 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Sugt1Q9CX34 336 aa15.13■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cyp2j7A0A140T8U1 504 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Hsdl2Q2TPA8 490 aaKnown RBP15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Sdf4Q61112 361 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Klhl31Q8BWA5 634 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 KynuQ9CXF0 464 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Pbxip1Q3TVI8 727 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 ThemisQ8BGW0 636 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Zkscan8Q8BSL0 588 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccdc87Q8CDL9 855 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Psmd2Q8VDM4 908 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Bnip3lQ9Z2F7 218 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ubn2Q80WC1 1314 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Tigd4Q8BUZ3 513 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Gpatch8A2A6A1 1505 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Prl7a2O54831 253 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rasgrf2P70392 1189 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Hddc2Q3SXD3 199 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Zfp51Q3U4L8 781 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nom1Q3UFM5 854 aaKnown RBP15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Hdac11Q91WA3 347 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Zcchc17Q9ESX4 241 aaKnown RBP15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Surf1P09925 306 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Kcnk9Q3LS21 402 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Prr18Q6PAN7 307 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Speer4eK7N6S8 255 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Nr1i2O54915 431 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Pde9aO70628 534 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Casp14O89094 257 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Acot10Q32MW3 439 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Foxd4Q60688 444 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Fermt3Q8K1B8 665 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Rasgrf1P27671 1262 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccdc85bQ6PDY0 202 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Kctd6Q8BNL5 237 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ginm1Q91WR6 327 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ssfa2Q922B9 1252 aa15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Sun1Q9D666 913 aaKnown RBP15.12■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Trpm2Q91YD4 1506 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Zscan2Q07230 614 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Cul4bA2A432 970 aaKnown RBP15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Ccnyl1D3YUJ3 367 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Akr1b10G5E895 316 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Naa35Q6PHQ8 725 aa15.11■□□□□ 0.01
Col5a1-201ENSMUST00000028280 Serpinb3dQ6UKZ0 387 aa15.11■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms