RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Madcam1Q61826 405 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Irak1Q62406 710 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Fkbp3Q62446 224 aaKnown RBP20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Asic1Q6NXK8 526 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Q8BT18 775 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Morc2bQ8C5W4 1022 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Tbc1d23Q8K0F1 684 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 HibadhQ99L13 335 aaKnown RBP20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Krtap5-3Q9D226 196 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Tsc2Q61037 1814 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Zfyve9A2A8R0 1397 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Akr1c19G3X9Y6 323 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ccdc51Q3URS9 406 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Lrrc55Q3UY51 311 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Eif3cQ8R1B4 911 aaKnown RBP20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rhobtb3Q9CTN4 611 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Hsd3b7Q9EQC1 369 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Sel1lQ9Z2G6 790 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Kif13bA0A286YCV9 1847 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Chrna9G3X8Z7 479 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Prl2c3P04768 224 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Mboat4P0C7A3 435 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 RaraP11416 462 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ifnar1P33896 590 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Prpf38aQ4FK66 312 aaKnown RBP20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 HyiQ8R1F5 277 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Srgap2Q91Z67 1071 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 EhhadhQ9DBM2 718 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ipo7Q9EPL8 1038 aaKnown RBP20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Tfap4Q9JIZ5 338 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Aknad1E9Q8N6 675 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 NpcdF8VQB8 469 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Evi5P97366 809 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ssrp1Q08943 708 aaKnown RBP20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ccdc42Q5SV66 316 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 OplahQ8K010 1288 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rab3il1Q8VDV3 383 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 UvssaQ9D479 717 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 GsdmeQ9Z2D3 512 aa20.93■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 TicrrQ8BQ33 1889 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Foxn2E9Q7L6 429 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Zfp781Q0P5U5 243 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rhpn1Q61085 643 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Grm4Q68EF4 912 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Fhod1Q6P9Q4 1197 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 D130040H23RikQ8BII3 405 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Znf131Q8K3J5 619 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Gdap1l1Q8VE33 370 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Sh2b1Q91ZM2 756 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Dydc2Q9D3X8 139 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Sorbs3Q9R1Z8 733 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rbm6S4R1W5 1118 aaKnown RBP20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Zfp831A2ADM8 1628 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Alppl2P24823 529 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Tmtc1Q3UV71 942 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Tnni3kQ5GIG6 834 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Maip1Q8BHE8 291 aa20.92■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Fam186bD3Z420 943 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Gcnt1Q09324 428 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Hook2Q7TMK6 716 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 GlyctkQ8QZY2 523 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Mrpl12Q9DB15 201 aaKnown RBP20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Slfn1Q9Z0I7 337 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Homer1Q9Z2Y3 366 aa20.91■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Gna11P21278 359 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Eya3P97480 510 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Acot10Q32MW3 439 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Arid3aQ62431 601 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Cdk17Q8K0D0 523 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 EpgnQ924X1 152 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Sh3tc1G3X9F6 1346 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Qtrt2B8ZXI1 415 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Cdk8Q8R3L8 464 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Grin3bQ91ZU9 1003 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Cmtr1Q9DBC3 837 aa20.9■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Gm7356A0A087WSA6 508 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Enc1O35709 589 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Krt18P05784 423 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 NfixP70257 488 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 VrtnQ3SYK4 740 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Arhgef2Q60875 985 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Kcnj11Q61743 390 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Jade2Q6ZQF7 829 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 TbcbQ9D1E6 244 aa20.89■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 DnttP09838 530 aa20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 NeblQ0II04 452 aa20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Lrriq3Q14DL3 633 aa20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Sf3b2Q3UJB0 878 aaKnown RBP20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Hirip3Q8BLH7 601 aa20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Slc9b1Q8C0X2 565 aa20.89■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Zscan18E9PUD6 809 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Lrrc6O88978 473 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Ccdc114Q3UX62 658 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Camsap3Q80VC9 1252 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Kiaa0319lQ8K135 1048 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Atp1a1Q8VDN2 1023 aaKnown RBP20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Nck2O55033 380 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Hmgb1P63158 215 aaKnown RBP20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Znf280dQ68FE8 974 aa20.88■□□□□ 0.93
Shkbp1-201ENSMUST00000003857 Sdccag8Q80UF4 717 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms