RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W SET5P38890 526 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ZRG8P40021 1076 aa2.04□□□□□ -2.08
USO1YDL058W ATF1P40353 525 aa2.04□□□□□ -2.08
USO1YDL058W FMP32P43557 207 aa2.04□□□□□ -2.08
USO1YDL058W PFD1P46988 109 aa2.04□□□□□ -2.08
USO1YDL058W HLJ1P48353 224 aa2.04□□□□□ -2.08
USO1YDL058W YGL108CP53139 140 aa2.04□□□□□ -2.08
USO1YDL058W DAK1P54838 584 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W SND1Q04007 877 aa2.04□□□□□ -2.08
USO1YDL058W YMR087WQ04299 284 aa2.04□□□□□ -2.08
USO1YDL058W TOS4Q06266 489 aa2.04□□□□□ -2.08
USO1YDL058W CDC45Q08032 650 aa2.04□□□□□ -2.08
USO1YDL058W DCI1Q08558 271 aa2.04□□□□□ -2.08
USO1YDL058W RGT2Q12300 763 aa2.04□□□□□ -2.08
USO1YDL058W SCEIP03882 235 aa2.04□□□□□ -2.08
USO1YDL058W RPS6AP0CX37 236 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W RPS6BP0CX38 236 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W HSF1P10961 833 aa2.04□□□□□ -2.08
USO1YDL058W ABF1P14164 731 aa2.04□□□□□ -2.08
USO1YDL058W SNF5P18480 905 aa2.04□□□□□ -2.08
USO1YDL058W SNF6P18888 332 aa2.04□□□□□ -2.08
USO1YDL058W RDS2P19541 446 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W SIS1P25294 352 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ARE1P25628 610 aa2.04□□□□□ -2.08
USO1YDL058W CAP1P28495 268 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W FAA1P30624 700 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W NTH1P32356 751 aa2.04□□□□□ -2.08
USO1YDL058W BCK2P33306 851 aa2.04□□□□□ -2.08
USO1YDL058W IFA38P38286 347 aa2.04□□□□□ -2.08
USO1YDL058W BIT2P38346 545 aa2.04□□□□□ -2.08
USO1YDL058W OSH3P38713 996 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W WSS1P38838 269 aa2.04□□□□□ -2.08
USO1YDL058W NPR2P39923 615 aa2.04□□□□□ -2.08
USO1YDL058W MEP1P40260 492 aa2.04□□□□□ -2.08
USO1YDL058W GPP1P41277 250 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W SMK1P41808 388 aa2.04□□□□□ -2.08
USO1YDL058W HXT14P42833 540 aa2.04□□□□□ -2.08
USO1YDL058W SKP2P42843 763 aa2.04□□□□□ -2.08
USO1YDL058W PTK2P47116 818 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W MCM22P47167 239 aa2.04□□□□□ -2.08
USO1YDL058W PEX21P50091 288 aa2.04□□□□□ -2.08
USO1YDL058W GTR2P53290 341 aa2.04□□□□□ -2.08
USO1YDL058W SLM2P53955 656 aa2.04□□□□□ -2.08
USO1YDL058W ALD6P54115 500 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ERG5P54781 538 aa2.04□□□□□ -2.08
USO1YDL058W URH1Q04179 340 aa2.04□□□□□ -2.08
USO1YDL058W TAP42Q04372 366 aa2.04□□□□□ -2.08
USO1YDL058W BUR2Q05949 395 aa2.04□□□□□ -2.08
USO1YDL058W PER33Q12144 273 aa2.04□□□□□ -2.08
USO1YDL058W DCN1Q12395 269 aa2.04□□□□□ -2.08
USO1YDL058W RPO21P04050 1733 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W TRP3P00937 484 aa2.04□□□□□ -2.08
USO1YDL058W CBP6P07253 162 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W MNE1P24720 663 aa2.04□□□□□ -2.08
USO1YDL058W PUF4P25339 888 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
USO1YDL058W KIN82P25341 720 aa2.04□□□□□ -2.08
USO1YDL058W AAR2P32357 355 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W PEX2P32800 271 aa2.04□□□□□ -2.08
USO1YDL058W ADD66P36040 267 aa2.04□□□□□ -2.08
USO1YDL058W YBL029WP38201 376 aa2.04□□□□□ -2.08
USO1YDL058W TSL1P38427 1098 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W ERC1P38767 581 aa2.04□□□□□ -2.08
USO1YDL058W YHR202WP38887 602 aa2.04□□□□□ -2.08
USO1YDL058W BOL3P39724 118 aa2.04□□□□□ -2.08
USO1YDL058W DSE1P40077 573 aa2.04□□□□□ -2.08
USO1YDL058W RGI2P40188 164 aa2.04□□□□□ -2.08
USO1YDL058W POL31P46957 487 aa2.04□□□□□ -2.08
USO1YDL058W TRM9P49957 279 aa2.04□□□□□ -2.08
USO1YDL058W PSP1P50896 841 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W MPP6P53725 186 aaPredicted RBP2.04□□□□□ -2.08
USO1YDL058W PRM1P53835 661 aa2.04□□□□□ -2.08
USO1YDL058W ENT5Q03769 411 aaKnown RBP2.04□□□□□ -2.08
USO1YDL058W LIP2Q06005 328 aa2.04□□□□□ -2.08
USO1YDL058W YPR078CQ06813 372 aa2.04□□□□□ -2.08
USO1YDL058W SYT1Q06836 1226 aa2.04□□□□□ -2.08
USO1YDL058W AEP3Q12089 606 aa2.04□□□□□ -2.08
USO1YDL058W PTC5Q12511 572 aa2.04□□□□□ -2.08
USO1YDL058W SLO1Q3E784 85 aa2.04□□□□□ -2.08
USO1YDL058W MTR10Q99189 972 aa2.04□□□□□ -2.08
USO1YDL058W YRF1-4O13559 1382 aa2.03□□□□□ -2.08
USO1YDL058W CDC8P00572 216 aa2.03□□□□□ -2.08
USO1YDL058W SPS2P08459 502 aa2.03□□□□□ -2.08
USO1YDL058W YER152CP10356 443 aa2.03□□□□□ -2.08
USO1YDL058W ATE1P16639 503 aa2.03□□□□□ -2.08
USO1YDL058W SYP1P25623 870 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W RAD14P28519 371 aa2.03□□□□□ -2.08
USO1YDL058W SFA1P32771 386 aa2.03□□□□□ -2.08
USO1YDL058W GSP1P32835 219 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W CMC1P36064 111 aa2.03□□□□□ -2.08
USO1YDL058W YKR075CP36155 307 aa2.03□□□□□ -2.08
USO1YDL058W YBL086CP38177 466 aa2.03□□□□□ -2.08
USO1YDL058W AMN1P38285 549 aaPredicted RBP2.03□□□□□ -2.08
USO1YDL058W YBR197CP38306 217 aa2.03□□□□□ -2.08
USO1YDL058W YHR035WP38769 630 aa2.03□□□□□ -2.08
USO1YDL058W CCT6P39079 546 aa2.03□□□□□ -2.08
USO1YDL058W SEC72P39742 193 aaKnown RBP2.03□□□□□ -2.08
USO1YDL058W SER3P40054 469 aa2.03□□□□□ -2.08
USO1YDL058W KTR7P40504 517 aa2.03□□□□□ -2.08
USO1YDL058W CPR7P47103 393 aa2.03□□□□□ -2.08
USO1YDL058W RAD17P48581 401 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms