RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 C6orf50Q9HD87 102 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 PRR12Q9ULL5 1215 aa20.13■□□□□ 0.81
PHGDH-232ENST00000641947 NOL7Q9UMY1 257 aaKnown RBP20.13■□□□□ 0.81
PHGDH-232ENST00000641947 RLFQ13129 1914 aa20.12■□□□□ 0.81
PHGDH-232ENST00000641947 NDUFA8P51970 172 aa20.12■□□□□ 0.81
PHGDH-232ENST00000641947 PPP1R18Q6NYC8 613 aa20.12■□□□□ 0.81
PHGDH-232ENST00000641947 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
PHGDH-232ENST00000641947 SH2D4AQ9H788 454 aa20.12■□□□□ 0.81
PHGDH-232ENST00000641947 CCDC194A0A1B0GVG4 234 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 GNA11P29992 359 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 TRAPPC10P48553 1259 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 ADCY7P51828 1080 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 FAM160A1Q05DH4 1040 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 IKQ13123 557 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-232ENST00000641947 CAMK4Q16566 473 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 INF2Q27J81 1249 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 DPY19L2Q6NUT2 758 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 LRSAM1Q6UWE0 723 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 FMR1NBQ8N0W7 255 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-232ENST00000641947 KLRG1Q96E93 195 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 CLSTN2Q9H4D0 955 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 GINM1Q9NU53 330 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 BIN2Q9UBW5 565 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-232ENST00000641947 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 PTPREP23469 700 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 STAT2P52630 851 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 JAKMIP3Q5VZ66 844 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 KRI1Q8N9T8 703 aaKnown RBP20.11■□□□□ 0.81
PHGDH-232ENST00000641947 NUP62CLQ9H1M0 184 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 DDX19AQ9NUU7 478 aaKnown RBP20.11■□□□□ 0.81
PHGDH-232ENST00000641947 FBXO28Q9NVF7 368 aa20.11■□□□□ 0.81
PHGDH-232ENST00000641947 ZC3H4Q9UPT8 1303 aaKnown RBP20.1■□□□□ 0.81
PHGDH-232ENST00000641947 COL11A1P12107 1806 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-232ENST00000641947 POTECB2RU33 542 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 GRIN3BO60391 1043 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 CUTAO60888 179 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 PFKFB1P16118 471 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 CMA1P23946 247 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 EPHX2P34913 555 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 PRKG1Q13976 671 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 UBE2SQ16763 222 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 CCDC73Q6ZRK6 1079 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 REXO1Q8N1G1 1221 aaKnown RBP20.1■□□□□ 0.81
PHGDH-232ENST00000641947 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 HOOK2Q96ED9 719 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 FEZ1Q99689 392 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 KIAA1683Q9H0B3 1180 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 RIC8AQ9NPQ8 531 aa20.1■□□□□ 0.81
PHGDH-232ENST00000641947 MORC2Q9Y6X9 1032 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-232ENST00000641947 GOLGA6L3A6NEY3 463 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 CLK2P49760 499 aaKnown RBP20.09■□□□□ 0.81
PHGDH-232ENST00000641947 SPECC1Q5M775 1068 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 RESP18Q5W5W9 173 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 HPSEQ9Y251 543 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
PHGDH-232ENST00000641947 EDIL3O43854 480 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 USP2O75604 605 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-232ENST00000641947 PTPRAP18433 802 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 MCM7P33993 719 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 ATP2C1P98194 919 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-232ENST00000641947 PTGDRQ13258 359 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 MTMR2Q13614 643 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 KRT25Q7Z3Z0 450 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 C4orf32Q8N8J7 132 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.08■□□□□ 0.812e-7■■□□□ 13.5
PHGDH-232ENST00000641947 DCPSQ96C86 337 aaKnown RBP20.08■□□□□ 0.81
PHGDH-232ENST00000641947 FUCA2Q9BTY2 467 aa20.08■□□□□ 0.81
PHGDH-232ENST00000641947 SRPRBQ9Y5M8 271 aaKnown RBP20.08■□□□□ 0.81
PHGDH-232ENST00000641947 FAM237AA0A1B0GTK4 181 aa20.08■□□□□ 0.8
PHGDH-232ENST00000641947 USH1GQ495M9 461 aa20.08■□□□□ 0.8
PHGDH-232ENST00000641947 RBM43Q6ZSC3 357 aaKnown RBP20.08■□□□□ 0.8
PHGDH-232ENST00000641947 USP50Q70EL3 339 aaPredicted RBP20.08■□□□□ 0.8
PHGDH-232ENST00000641947 EMILIN3Q9NT22 766 aa20.08■□□□□ 0.8
PHGDH-232ENST00000641947 OPLAHO14841 1288 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 PLA2G6O60733 806 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
PHGDH-232ENST00000641947 IL17AQ16552 155 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 SUPT20HL1Q3ZLR7 823 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 FBXO11Q86XK2 927 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 SULF1Q8IWU6 871 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 KIFC2Q96AC6 838 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 WDR18Q9BV38 432 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 AMNQ9BXJ7 453 aa20.07■□□□□ 0.8
PHGDH-232ENST00000641947 RANBP17Q9H2T7 1088 aaKnown RBP20.07■□□□□ 0.8
PHGDH-232ENST00000641947 SPP2Q13103 211 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 NOL9Q5SY16 702 aaKnown RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP49Q70CQ1 688 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 CUL5Q93034 780 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 P2RX7Q99572 595 aaKnown RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 CSRNP2Q9H175 543 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 TMEM60Q9H2L4 133 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 TNMDQ9H2S6 317 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 TAF1DQ9H5J8 278 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 PSTPIP2Q9H939 334 aa20.06■□□□□ 0.8
PHGDH-232ENST00000641947 RBBP6Q7Z6E9 1792 aaKnown RBP20.06■□□□□ 0.8
PHGDH-232ENST00000641947 USP17L15C9J2P7 530 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms