RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF543Q08ER8 600 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 LHX8Q68G74 356 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 PNMA1Q8ND90 353 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 TRPV1Q8NER1 839 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 AGBL1Q96MI9 1066 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 ESYT1Q9BSJ8 1104 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 UBAC1Q9BSL1 405 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 HTATIP2Q9BUP3 242 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 KAT14Q9H8E8 782 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 HOMER2Q9NSB8 354 aa17.64■□□□□ 0.41
PHGDH-231ENST00000641939 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 DNAJC25-GNG10A0A024R161 153 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 MSCO60682 206 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 TKFCQ3LXA3 575 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 GPATCH4Q5T3I0 446 aaKnown RBP17.63■□□□□ 0.41
PHGDH-231ENST00000641939 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 PAWRQ96IZ0 340 aaKnown RBP17.63■□□□□ 0.41
PHGDH-231ENST00000641939 TINF2Q9BSI4 451 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 RANBP17Q9H2T7 1088 aaKnown RBP17.63■□□□□ 0.41
PHGDH-231ENST00000641939 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
PHGDH-231ENST00000641939 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
PHGDH-231ENST00000641939 E7EWF7 191 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 NECAB2Q7Z6G3 386 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 DIS3LQ8TF46 1054 aaKnown RBP17.62■□□□□ 0.41
PHGDH-231ENST00000641939 TRERF1Q96PN7 1200 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 LSG1Q9H089 658 aaKnown RBP17.62■□□□□ 0.41
PHGDH-231ENST00000641939 RNF146Q9NTX7 359 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 DDX20Q9UHI6 824 aaKnown RBP17.62■□□□□ 0.41
PHGDH-231ENST00000641939 CCPG1Q9ULG6 757 aa17.62■□□□□ 0.41
PHGDH-231ENST00000641939 ICAM1P05362 532 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 ALAS1P13196 640 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 MNX1P50219 401 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-231ENST00000641939 PRAMEF19Q5SWL8 479 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 IFIT1BQ5T764 474 aaKnown RBP17.61■□□□□ 0.41
PHGDH-231ENST00000641939 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
PHGDH-231ENST00000641939 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
PHGDH-231ENST00000641939 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 TAF6LQ9Y6J9 622 aa17.61■□□□□ 0.41
PHGDH-231ENST00000641939 SEPT4O43236 478 aa17.6■□□□□ 0.41
PHGDH-231ENST00000641939 SEC23AQ15436 765 aa17.6■□□□□ 0.41
PHGDH-231ENST00000641939 STOX1Q6ZVD7 989 aa17.6■□□□□ 0.41
PHGDH-231ENST00000641939 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-231ENST00000641939 DPF3Q92784 378 aa17.6■□□□□ 0.41
PHGDH-231ENST00000641939 LCTP09848 1927 aa17.6■□□□□ 0.41
PHGDH-231ENST00000641939 PFASO15067 1338 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 SYNGAP1Q96PV0 1343 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 CENPBP07199 599 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-231ENST00000641939 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 ASPRV1Q53RT3 343 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 CASC1Q6TDU7 716 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 MAMDC4Q6UXC1 1216 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 ANO2Q9NQ90 1003 aa17.59■□□□□ 0.41
PHGDH-231ENST00000641939 A1CFQ9NQ94 594 aaKnown RBP17.59■□□□□ 0.41
PHGDH-231ENST00000641939 BAZ2BQ9UIF8 2168 aaKnown RBP17.58■□□□□ 0.4
PHGDH-231ENST00000641939 ERICH2A1L162 156 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 POTEB2H3BUK9 544 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 IFIT3O14879 490 aaKnown RBP17.58■□□□□ 0.4
PHGDH-231ENST00000641939 CDC45O75419 566 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 PARP1P09874 1014 aaKnown RBP17.58■□□□□ 0.4
PHGDH-231ENST00000641939 MUM1L1Q5H9M0 696 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 C11orf49Q9H6J7 331 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 PNMA2Q9UL42 364 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 CNPY2Q9Y2B0 182 aa17.58■□□□□ 0.4
PHGDH-231ENST00000641939 TAL1P17542 331 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-231ENST00000641939 CNTN2Q02246 1040 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
PHGDH-231ENST00000641939 FAM133AQ8N9E0 248 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 FGD4Q96M96 766 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 UBA5Q9GZZ9 404 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 CPVLQ9H3G5 476 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 CYP39A1Q9NYL5 469 aa17.57■□□□□ 0.4
PHGDH-231ENST00000641939 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 SLC27A2O14975 620 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 SLC34A2O95436 690 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-231ENST00000641939 ZNF865P0CJ78 1059 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-231ENST00000641939 COL6A1P12109 1028 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 WTAPQ15007 396 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 NECTIN1Q15223 517 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 ERICH6BQ5W0A0 696 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 CHST3Q7LGC8 479 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-231ENST00000641939 ARRDC4Q8NCT1 418 aa17.56■□□□□ 0.4
PHGDH-231ENST00000641939 DNM1LO00429 736 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 EVI5O60447 810 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 ANTXR2P58335 489 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 TMEM67Q5HYA8 995 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-231ENST00000641939 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 DNAH12Q6ZR08 3092 aa17.55■□□□□ 0.4
PHGDH-231ENST00000641939 SOWAHBA6NEL2 793 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms