RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
CASC19-247ENST00000641642 TPCN1Q9ULQ1 816 aa12.04□□□□□ -0.48
CASC19-247ENST00000641642 RBM19Q9Y4C8 960 aaKnown RBP12.04□□□□□ -0.48
CASC19-247ENST00000641642 A0A1W2PRG0 241 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 WDR46O15213 610 aaKnown RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 CDKL5O76039 1030 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 PARP1P09874 1014 aaKnown RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 PDHBP11177 359 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
CASC19-247ENST00000641642 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
CASC19-247ENST00000641642 GRM4Q14833 912 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 MOB2Q70IA6 237 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 OPTNQ96CV9 577 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 FEZ1Q99689 392 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
CASC19-247ENST00000641642 ELP3Q9H9T3 547 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 TMOD4Q9NZQ9 345 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 BRPF3Q9ULD4 1205 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
CASC19-247ENST00000641642 A0A0G2JLL6 359 aaPredicted RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 FDX1P10109 184 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 SLC1A4P43007 532 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 GTF2A2P52657 109 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 INHBEP58166 350 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 ME3Q16798 604 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 RTN1Q16799 776 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 PRRT2Q7Z6L0 340 aaPredicted RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 GTF3C6Q969F1 213 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
CASC19-247ENST00000641642 WNK4Q96J92 1243 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 CLMNQ96JQ2 1002 aa12.02□□□□□ -0.49
CASC19-247ENST00000641642 GOLGA8AA7E2F4 631 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 CPLX1O14810 134 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 IRF6O14896 467 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 NDUFB10O96000 172 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 CETPP11597 493 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 BMP3P12645 472 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
CASC19-247ENST00000641642 ECE1P42892 770 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 PABPC4Q13310 644 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC19-247ENST00000641642 MTMR2Q13614 643 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 CUL4AQ13619 759 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 NUP133Q8WUM0 1156 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 SENP2Q9HC62 589 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 PNMA2Q9UL42 364 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.01□□□□□ -0.49
CASC19-247ENST00000641642 PTPRFP10586 1907 aa12.01□□□□□ -0.49
CASC19-247ENST00000641642 MANSC4A6NHS7 340 aaPredicted RBP12□□□□□ -0.49
CASC19-247ENST00000641642 TRIM75PA6NK02 468 aa12□□□□□ -0.49
CASC19-247ENST00000641642 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
CASC19-247ENST00000641642 IFNAR1P17181 557 aa12□□□□□ -0.49
CASC19-247ENST00000641642 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
CASC19-247ENST00000641642 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
CASC19-247ENST00000641642 HMGN5P82970 282 aaKnown RBP12□□□□□ -0.49
CASC19-247ENST00000641642 CLEC10AQ8IUN9 316 aa12□□□□□ -0.49
CASC19-247ENST00000641642 FAM177A1Q8N128 213 aaPredicted RBP12□□□□□ -0.49
CASC19-247ENST00000641642 RGS22Q8NE09 1264 aa12□□□□□ -0.49
CASC19-247ENST00000641642 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
CASC19-247ENST00000641642 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
CASC19-247ENST00000641642 MAD2L2Q9UI95 211 aa12□□□□□ -0.49
CASC19-247ENST00000641642 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
CASC19-247ENST00000641642 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
CASC19-247ENST00000641642 KIF3AQ9Y496 699 aa12□□□□□ -0.49
CASC19-247ENST00000641642 MYPNQ86TC9 1320 aa12□□□□□ -0.49
CASC19-247ENST00000641642 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
CASC19-247ENST00000641642 RASSF10A6NK89 507 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 KLRF2D3W0D1 207 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 TLL1O43897 1013 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 SLC10A3P09131 477 aa11.99□□□□□ -0.49
CASC19-247ENST00000641642 STAT2P52630 851 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms